RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
SEC13-202ENST00000350697 RBBP6Q7Z6E9 1792 aaKnown RBP16.09■□□□□ 0.17
SEC13-202ENST00000350697 CALML3P27482 149 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 GHRHRQ02643 423 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 SSRP1Q08945 709 aaKnown RBP16.08■□□□□ 0.16
SEC13-202ENST00000350697 PFKFB3Q16875 520 aaPredicted RBP16.08■□□□□ 0.16
SEC13-202ENST00000350697 MFSD14CQ5VZR4 134 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
SEC13-202ENST00000350697 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
SEC13-202ENST00000350697 GPKOWQ92917 476 aaPredicted RBP eCLIP16.08■□□□□ 0.164e-7■□□□□ 8.6
SEC13-202ENST00000350697 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.16
SEC13-202ENST00000350697 MAP3K20Q9NYL2 800 aaKnown RBP16.08■□□□□ 0.16
SEC13-202ENST00000350697 CFBP00751 764 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 IGHA2P01877 340 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 INHAP05111 366 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 SCG2P13521 617 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 MCM2P49736 904 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 HSD17B4P51659 736 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 UBXN2AP68543 259 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 WWC2Q6AWC2 1192 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
SEC13-202ENST00000350697 ABHD8Q96I13 439 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 ZNF333Q96JL9 665 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 TINF2Q9BSI4 451 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
SEC13-202ENST00000350697 ADD3Q9UEY8 706 aaKnown RBP16.07■□□□□ 0.16
SEC13-202ENST00000350697 SOWAHBA6NEL2 793 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 GCOM1H8Y6P7 765 aaPredicted RBP16.06■□□□□ 0.16
SEC13-202ENST00000350697 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 POLR2MP0CAP2 368 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 NAPAP54920 295 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 PKN1Q16512 942 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 MAMDC4Q6UXC1 1216 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
SEC13-202ENST00000350697 FGD4Q96M96 766 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 RBM19Q9Y4C8 960 aaKnown RBP16.06■□□□□ 0.16
SEC13-202ENST00000350697 LCTP09848 1927 aa16.06■□□□□ 0.16
SEC13-202ENST00000350697 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 ASB14A6NK59 587 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 STXBP3O00186 592 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 CAPN15O75808 1086 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 DEXIO95424 95 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 CTDNEP1O95476 244 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 CYP2C19P33261 490 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
SEC13-202ENST00000350697 CUL5Q93034 780 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
SEC13-202ENST00000350697 PSTPIP2Q9H939 334 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
SEC13-202ENST00000350697 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
SEC13-202ENST00000350697 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
SEC13-202ENST00000350697 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
SEC13-202ENST00000350697 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
SEC13-202ENST00000350697 TRIM32Q13049 653 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 MAP3K21Q5TCX8 1036 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 TYW1BQ6NUM6 668 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 CCDC12Q8WUD4 166 aaPredicted RBP16.04■□□□□ 0.16
SEC13-202ENST00000350697 COL20A1Q9P218 1284 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 ASTN1O14525 1302 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 CENPFP49454 3210 aa16.04■□□□□ 0.16
SEC13-202ENST00000350697 MCM3APO60318 1980 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 PIK3CDO00329 1044 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 ALDH5A1P51649 535 aaPredicted RBP16.03■□□□□ 0.16
SEC13-202ENST00000350697 ST3GAL1Q11201 340 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 ARMCX2Q7L311 632 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 CCDC83Q8IWF9 413 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 NSUN7Q8NE18 718 aaKnown RBP16.03■□□□□ 0.16
SEC13-202ENST00000350697 SMARCC2Q8TAQ2 1214 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
SEC13-202ENST00000350697 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
SEC13-202ENST00000350697 GLT8D2Q9H1C3 349 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 NRBP1Q9UHY1 535 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 RPTORQ8N122 1335 aa16.03■□□□□ 0.16
SEC13-202ENST00000350697 ESYT2A0FGR8 921 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 B4DLN1 442 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 MEIS2O14770 477 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 SNAI1O95863 264 aaPredicted RBP16.02■□□□□ 0.16
SEC13-202ENST00000350697 MRPL12P52815 198 aaKnown RBP16.02■□□□□ 0.16
SEC13-202ENST00000350697 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 RMDN3Q96TC7 470 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 LLPHQ9BRT6 129 aaKnown RBP16.02■□□□□ 0.16
SEC13-202ENST00000350697 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
SEC13-202ENST00000350697 ORC3Q9UBD5 711 aaPredicted RBP16.02■□□□□ 0.16
SEC13-202ENST00000350697 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.16
SEC13-202ENST00000350697 KIAA0100Q14667 2235 aaKnown RBP16.02■□□□□ 0.15
SEC13-202ENST00000350697 CYBAP13498 195 aa16.02■□□□□ 0.15
SEC13-202ENST00000350697 CCL5P13501 91 aa16.02■□□□□ 0.15
SEC13-202ENST00000350697 ADCY7P51828 1080 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms