RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FANCCQ00597 558 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 PDIA5Q14554 519 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 KCNB1Q14721 858 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 KARSQ15046 597 aaKnown RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 UBE2SQ16763 222 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 NBPF9Q3BBW0 867 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 KIAA1755Q5JYT7 1200 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 RRAGBQ5VZM2 374 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 MOXD1Q6UVY6 613 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 CDAN1Q8IWY9 1227 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 ACER1Q8TDN7 264 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 LRRC15Q8TF66 581 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 TEPSINQ96N21 525 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 NUP88Q99567 741 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 NAP1L4Q99733 375 aaKnown RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 AMNQ9BXJ7 453 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 XPO4Q9C0E2 1151 aaKnown RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 TMEM39BQ9GZU3 492 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 ARHGEF10LQ9HCE6 1279 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 MYOZ2Q9NPC6 264 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 FANCLQ9NW38 375 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 IFNKQ9P0W0 207 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 PYCARDQ9ULZ3 195 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 PCDHA1Q9Y5I3 950 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 MYH8P13535 1937 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 TMEM232C9JQI7 657 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 MEIS2O14770 477 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 OPLAHO14841 1288 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 SLC26A4O43511 780 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 KLRC4O43908 158 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 ATP1A3P13637 1013 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 CASP1P29466 404 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 LMOD1P29536 600 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-203ENST00000350034 UBA7P41226 1012 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 ECE1P42892 770 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 USP11P51784 963 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 CALCRLQ16602 461 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 SPATA1Q5VX52 437 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 CABP7Q86V35 215 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 FBXO11Q86XK2 927 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 CACTINQ8WUQ7 758 aaKnown RBP7.81□□□□□ -1.16
TRIM55-203ENST00000350034 HAS1Q92839 578 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 P2RX7Q99572 595 aaKnown RBP7.81□□□□□ -1.16
TRIM55-203ENST00000350034 ANO3Q9BYT9 981 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 VCPKMTQ9H867 229 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 VEZTQ9HBM0 779 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 GINM1Q9NU53 330 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 RMND1Q9NWS8 449 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 PRR12Q9ULL5 1215 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 NFE2L3Q9Y4A8 694 aa7.81□□□□□ -1.16
TRIM55-203ENST00000350034 MYH4Q9Y623 1939 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 CBFA2T2O43439 604 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 RHOBTB3O94955 611 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 EGFRP00533 1210 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 FOSP01100 380 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 RPN1P04843 607 aaKnown RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 ASNSP08243 561 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 PLCG1P19174 1290 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 CIITAP33076 1130 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 TECP42680 631 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 TNNI2P48788 182 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 GSDMDP57764 484 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 TRAF1Q13077 416 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 GRB10Q13322 594 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 TNFAIP1Q13829 316 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 DHX8Q14562 1220 aaKnown RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 RASA3Q14644 834 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 NOLC1Q14978 699 aaKnown RBP eCLIP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 TMEM119Q4V9L6 283 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 HYIQ5T013 277 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 ZNF658Q5TYW1 1059 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 CDKAL1Q5VV42 579 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 CNNM4Q6P4Q7 775 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 USP17L6PQ6QN14 398 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 APTXQ7Z2E3 356 aaKnown RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 FAM160B2Q86V87 743 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 LRRC8AQ8IWT6 810 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 DRC7Q8IY82 874 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 STAMQ92783 540 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 NAP1L5Q96NT1 182 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 PNMA5Q96PV4 448 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 C7orf25Q9BPX7 421 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 DEFB129Q9H1M3 183 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 BLZF1Q9H2G9 400 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 RANBP17Q9H2T7 1088 aaKnown RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 GOPCQ9HD26 462 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 KCNMB3Q9NPA1 279 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 BLOC1S4Q9NUP1 217 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 INTS13Q9NVM9 706 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms