RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 BMP2KQ9NSY1 1161 aaPredicted RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 RTEL1Q9NZ71 1219 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 V9GYY5 206 aaPredicted RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 SPAG9O60271 1321 aaKnown RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 TSPAN4O14817 238 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 CLEC3AO75596 197 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 LTKP29376 864 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 GSDMDP57764 484 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 FAPQ12884 760 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 NPAS4Q8IUM7 802 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 CCDC116Q8IYX3 515 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 MPNDQ8N594 471 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 C3orf49Q96BT1 292 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 TMX3Q96JJ7 454 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 FAM107BQ9H098 131 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 TAB2Q9NYJ8 693 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ARHGAP28Q9P2N2 729 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ARHGAP5Q13017 1502 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 H7C0S8 307 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 CD3EP07766 207 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 DESP17661 470 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 PTPRAP18433 802 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 VCAM1P19320 739 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ASIC2Q16515 512 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 CCDC152Q4G0S7 254 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 CCDC73Q6ZRK6 1079 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 IFNL2Q8IZJ0 200 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ERO1AQ96HE7 468 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 ZNF830Q96NB3 372 aaPredicted RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 DPH5Q9H2P9 285 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 DDX19AQ9NUU7 478 aaKnown RBP6.63□□□□□ -1.35
RFC1-201ENST00000349703 DNAJC28Q9NX36 388 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
RFC1-201ENST00000349703 GNAT3A8MTJ3 354 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 H3BQV1 296 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 PRAMEF4O60810 478 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 AKAP17AQ02040 695 aaKnown RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 DARS2Q6PI48 645 aaKnown RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 C6orf15Q6UXA7 325 aaPredicted RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 TOM1L2Q6ZVM7 507 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 AK5Q9Y6K8 562 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 FKTNO75072 461 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 KIAA0754O94854 1291 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 IVLP07476 585 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 IGFBP4P22692 258 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 BBOF1Q8ND07 529 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 GRAMD1AQ96CP6 724 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 ALKBH4Q9NXW9 302 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 CLIP2Q9UDT6 1046 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 LIMCH1Q9UPQ0 1083 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 DCDC2BA2VCK2 349 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 SASH3O75995 380 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 MYL4P12829 197 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 CPB1P15086 417 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 CDK17Q00537 523 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 UBXN1Q04323 297 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 DDB1Q16531 1140 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 ATPAF1Q5TC12 328 aaPredicted RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 TMEM132EQ6IEE7 984 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 C12orf50Q8NA57 414 aaPredicted RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 LRRC46Q96FV0 321 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 TBCBQ99426 244 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 LHX6Q9UPM6 363 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 KIAA0556O60303 1618 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 TRBV23-1A0A0A0MS06 115 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 CCDC175P0C221 793 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 GNAT1P11488 350 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 CPA3P15088 417 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 CNTFP26441 200 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 PSMA5P28066 241 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 ADD2P35612 726 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 PSMC4P43686 418 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 ITGA8P53708 1063 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 BCAR1P56945 870 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 ICA1Q05084 483 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 TWISTNBQ3B726 338 aaPredicted RBP6.62□□□□□ -1.35
RFC1-201ENST00000349703 TRAPPC3LQ5T215 181 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 RNF19BQ6ZMZ0 732 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 GPT2Q8TD30 523 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 MAML1Q92585 1016 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 HSH2DQ96JZ2 352 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 MYLK2Q9H1R3 596 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 SPTLC3Q9NUV7 552 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 SLC25A13Q9UJS0 675 aa6.62□□□□□ -1.35
RFC1-201ENST00000349703 SHTN1A0MZ66 631 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 TRAF5O00463 557 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 ERLIN1O75477 346 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 WBP4O75554 376 aaKnown RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 GTF2A1P52655 376 aaPredicted RBP6.61□□□□□ -1.35
RFC1-201ENST00000349703 KYNUQ16719 465 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
RFC1-201ENST00000349703 SEC16BQ96JE7 1060 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms