RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CUTAO60888 179 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 ZNF202O95125 648 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 NONOQ15233 471 aaKnown RBP eCLIP15.18■□□□□ 0.02
UBA3-201ENST00000349511 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 FBXO11Q86XK2 927 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 BPIFA3Q9BQP9 254 aa15.18■□□□□ 0.02
UBA3-201ENST00000349511 SRPRBQ9Y5M8 271 aaKnown RBP15.18■□□□□ 0.02
UBA3-201ENST00000349511 ESYT2A0FGR8 921 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
UBA3-201ENST00000349511 PTPRAP18433 802 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 PDILTQ8N807 584 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 CUL5Q93034 780 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 RIC8AQ9NPQ8 531 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 ZNF112Q9UJU3 913 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 SYNPO2Q9UMS6 1093 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 SYKP43405 635 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 TRAPPC10P48553 1259 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 PTPN14Q15678 1187 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
UBA3-201ENST00000349511 RESP18Q5W5W9 173 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 MOB2Q70IA6 237 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 KRT25Q7Z3Z0 450 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 EPSTI1Q96J88 318 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 TMEM60Q9H2L4 133 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 PRDM4Q9UKN5 801 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
UBA3-201ENST00000349511 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 CDC25AP30304 524 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 NLRP12P59046 1061 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 NAA30Q147X3 362 aaPredicted RBP15.16■□□□□ 0.02
UBA3-201ENST00000349511 IL17AQ16552 155 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 CHURC1Q8WUH1 139 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
UBA3-201ENST00000349511 TANGO6Q9C0B7 1094 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 TRMT1Q9NXH9 659 aaKnown RBP15.16■□□□□ 0.02
UBA3-201ENST00000349511 PITPNM2Q9BZ72 1349 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 POTECB2RU33 542 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 BIN1O00499 593 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 MRPL12P52815 198 aaKnown RBP15.16■□□□□ 0.02
UBA3-201ENST00000349511 HMGCS2P54868 508 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 GSDMDP57764 484 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
UBA3-201ENST00000349511 NEK8Q86SG6 692 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 CCAR2Q8N163 923 aaKnown RBP15.16■□□□□ 0.02
UBA3-201ENST00000349511 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 UIMC1Q96RL1 719 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 KIAA1683Q9H0B3 1180 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
UBA3-201ENST00000349511 VCAM1P19320 739 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
UBA3-201ENST00000349511 PPP1R18Q6NYC8 613 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 C4orf32Q8N8J7 132 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 ZNF280CQ8ND82 737 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 TBC1D5Q92609 795 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 KCND1Q9NSA2 647 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 FEM1BQ9UK73 627 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 KCNH3Q9ULD8 1083 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 HPSEQ9Y251 543 aa15.15■□□□□ 0.02
UBA3-201ENST00000349511 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 EDIL3O43854 480 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 FLOT1O75955 427 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 SMC2O95347 1197 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 BACE1P56817 501 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 USP50Q70EL3 339 aaPredicted RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 CPXCR1Q8N123 301 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBA3-201ENST00000349511 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 XPO4Q9C0E2 1151 aaKnown RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 TAF1DQ9H5J8 278 aaPredicted RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 RPAP3Q9H6T3 665 aaPredicted RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 IFNKQ9P0W0 207 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 CLEC11AQ9Y240 323 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 MEIS2O14770 477 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 TDP2O95551 362 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 FMR1Q06787 632 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBA3-201ENST00000349511 VGLL4Q14135 290 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 TTLL12Q14166 644 aaPredicted RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 SYMPKQ92797 1274 aaKnown RBP15.14■□□□□ 0.01
UBA3-201ENST00000349511 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
UBA3-201ENST00000349511 OPLAHO14841 1288 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 WDR46O15213 610 aaKnown RBP15.13■□□□□ 0.01
UBA3-201ENST00000349511 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
UBA3-201ENST00000349511 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
UBA3-201ENST00000349511 NCAPHQ15003 741 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 TMC6Q7Z403 805 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms