RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CEP85LQ5SZL2 805 aa19.77■□□□□ 0.75
APP-202ENST00000348990 CEP57Q86XR8 500 aa19.77■□□□□ 0.75
APP-202ENST00000348990 RETREG2Q8NC44 543 aa19.77■□□□□ 0.75
APP-202ENST00000348990 CEP89Q96ST8 783 aa19.77■□□□□ 0.75
APP-202ENST00000348990 KRT12Q99456 494 aa19.77■□□□□ 0.75
APP-202ENST00000348990 TMEM94Q12767 1356 aa19.76■□□□□ 0.75
APP-202ENST00000348990 CCNE1P24864 410 aa19.76■□□□□ 0.75
APP-202ENST00000348990 TRAPPC10P48553 1259 aa19.76■□□□□ 0.75
APP-202ENST00000348990 GFPT1Q06210 699 aaPredicted RBP19.76■□□□□ 0.75
APP-202ENST00000348990 LETM2Q2VYF4 491 aa19.76■□□□□ 0.75
APP-202ENST00000348990 CFAP221Q4G0U5 840 aa19.76■□□□□ 0.75
APP-202ENST00000348990 SH2D4AQ9H788 454 aa19.76■□□□□ 0.75
APP-202ENST00000348990 JAG2Q9Y219 1238 aa19.76■□□□□ 0.75
APP-202ENST00000348990 GRIN2DO15399 1336 aa19.76■□□□□ 0.75
APP-202ENST00000348990 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
APP-202ENST00000348990 NKRFO15226 690 aaKnown RBP eCLIP19.76■□□□□ 0.75
APP-202ENST00000348990 FAM153BP0C7A2 387 aa19.76■□□□□ 0.75
APP-202ENST00000348990 PLCG1P19174 1290 aa19.76■□□□□ 0.75
APP-202ENST00000348990 FAM153CQ494X1 144 aa19.76■□□□□ 0.75
APP-202ENST00000348990 HAUS3Q68CZ6 603 aa19.76■□□□□ 0.75
APP-202ENST00000348990 DYMQ7RTS9 669 aa19.76■□□□□ 0.75
APP-202ENST00000348990 TNFRSF25Q93038 417 aa19.76■□□□□ 0.75
APP-202ENST00000348990 NOX5Q96PH1 765 aa19.76■□□□□ 0.75
APP-202ENST00000348990 DUSP9Q99956 384 aaKnown RBP19.76■□□□□ 0.75
APP-202ENST00000348990 FAM153AQ9UHL3 310 aa19.76■□□□□ 0.75
APP-202ENST00000348990 SCN11AQ9UI33 1791 aa19.76■□□□□ 0.75
APP-202ENST00000348990 CABP7Q86V35 215 aa19.75■□□□□ 0.75
APP-202ENST00000348990 DHTKD1Q96HY7 919 aaPredicted RBP19.75■□□□□ 0.75
APP-202ENST00000348990 CXorf56Q9H5V9 222 aa19.75■□□□□ 0.75
APP-202ENST00000348990 ARHGAP20Q9P2F6 1191 aa19.75■□□□□ 0.75
APP-202ENST00000348990 PACSIN2Q9UNF0 486 aaPredicted RBP19.75■□□□□ 0.75
APP-202ENST00000348990 NR1D1P20393 614 aa19.75■□□□□ 0.75
APP-202ENST00000348990 FGFR2P21802 821 aa19.75■□□□□ 0.75
APP-202ENST00000348990 CNTNAP5Q8WYK1 1306 aa19.75■□□□□ 0.75
APP-202ENST00000348990 FAM205AQ6ZU69 1335 aa19.75■□□□□ 0.75
APP-202ENST00000348990 MEFVO15553 781 aaPredicted RBP19.75■□□□□ 0.75
APP-202ENST00000348990 KIF5BP33176 963 aa19.75■□□□□ 0.75
APP-202ENST00000348990 LSP1P33241 339 aa19.75■□□□□ 0.75
APP-202ENST00000348990 ATP6V1AP38606 617 aa19.75■□□□□ 0.75
APP-202ENST00000348990 NAALADL2Q58DX5 795 aa19.75■□□□□ 0.75
APP-202ENST00000348990 KCNV1Q6PIU1 500 aa19.75■□□□□ 0.75
APP-202ENST00000348990 GIMAP8Q8ND71 665 aaPredicted RBP19.75■□□□□ 0.75
APP-202ENST00000348990 CCDC114Q96M63 670 aa19.75■□□□□ 0.75
APP-202ENST00000348990 GOLGA6L7A0A1B0GV03 622 aa19.74■□□□□ 0.75
APP-202ENST00000348990 LRRC53A6NM62 1247 aa19.74■□□□□ 0.75
APP-202ENST00000348990 BACH1O14867 736 aa19.74■□□□□ 0.75
APP-202ENST00000348990 GLI1P08151 1106 aa19.74■□□□□ 0.75
APP-202ENST00000348990 PAK2Q13177 524 aa19.74■□□□□ 0.75
APP-202ENST00000348990 ARL6IP4Q66PJ3 421 aaKnown RBP19.74■□□□□ 0.75
APP-202ENST00000348990 PIGBQ92521 554 aa19.74■□□□□ 0.75
APP-202ENST00000348990 CD248Q9HCU0 757 aa19.74■□□□□ 0.75
APP-202ENST00000348990 EPHB6O15197 1021 aa19.74■□□□□ 0.75
APP-202ENST00000348990 MYH10P35580 1976 aa19.74■□□□□ 0.75
APP-202ENST00000348990 EHHADHQ08426 723 aa19.74■□□□□ 0.75
APP-202ENST00000348990 PROCA1Q8NCQ7 364 aaPredicted RBP19.74■□□□□ 0.75
APP-202ENST00000348990 SH3GL2Q99962 352 aa19.74■□□□□ 0.75
APP-202ENST00000348990 MTA3Q9BTC8 594 aa19.74■□□□□ 0.75
APP-202ENST00000348990 RASSF10A6NK89 507 aa19.73■□□□□ 0.75
APP-202ENST00000348990 DDAH1O94760 285 aa19.73■□□□□ 0.75
APP-202ENST00000348990 PFKFB3Q16875 520 aaPredicted RBP19.73■□□□□ 0.75
APP-202ENST00000348990 WTIPA6NIX2 430 aaPredicted RBP19.73■□□□□ 0.75
APP-202ENST00000348990 RHOBTB3O94955 611 aa19.73■□□□□ 0.75
APP-202ENST00000348990 CYP2D6P10635 497 aa19.73■□□□□ 0.75
APP-202ENST00000348990 TECP42680 631 aa19.73■□□□□ 0.75
APP-202ENST00000348990 SF3B2Q13435 895 aaKnown RBP19.73■□□□□ 0.75
APP-202ENST00000348990 CDK5RAP3Q96JB5 506 aa19.73■□□□□ 0.75
APP-202ENST00000348990 NDST4Q9H3R1 872 aa19.73■□□□□ 0.75
APP-202ENST00000348990 VAT1LQ9HCJ6 419 aa19.73■□□□□ 0.75
APP-202ENST00000348990 CCNT1O60563 726 aaKnown RBP19.72■□□□□ 0.75
APP-202ENST00000348990 SLC1A4P43007 532 aa19.72■□□□□ 0.75
APP-202ENST00000348990 NAA35Q5VZE5 725 aa19.72■□□□□ 0.75
APP-202ENST00000348990 CCDC121Q6ZUS5 278 aa19.72■□□□□ 0.75
APP-202ENST00000348990 ACTN3Q08043 901 aaPredicted RBP19.72■□□□□ 0.75
APP-202ENST00000348990 CCDC155Q8N6L0 562 aa19.72■□□□□ 0.75
APP-202ENST00000348990 KLRC4O43908 158 aa19.72■□□□□ 0.75
APP-202ENST00000348990 CHRNDQ07001 517 aa19.72■□□□□ 0.75
APP-202ENST00000348990 KCNB1Q14721 858 aa19.72■□□□□ 0.75
APP-202ENST00000348990 TAF4BQ92750 862 aa19.72■□□□□ 0.75
APP-202ENST00000348990 SCLT1Q96NL6 688 aa19.72■□□□□ 0.75
APP-202ENST00000348990 STX8Q9UNK0 236 aa19.72■□□□□ 0.75
APP-202ENST00000348990 USP54Q70EL1 1684 aa19.72■□□□□ 0.75
APP-202ENST00000348990 MYO5AQ9Y4I1 1855 aaKnown RBP19.71■□□□□ 0.75
APP-202ENST00000348990 HDLBPQ00341 1268 aaKnown RBP19.71■□□□□ 0.75
APP-202ENST00000348990 TRADDQ15628 312 aa19.71■□□□□ 0.75
APP-202ENST00000348990 TXNRD1Q16881 649 aa19.71■□□□□ 0.75
APP-202ENST00000348990 CCT8L2Q96SF2 557 aa19.71■□□□□ 0.75
APP-202ENST00000348990 LRRC41Q15345 812 aa19.71■□□□□ 0.75
APP-202ENST00000348990 STAG2Q8N3U4 1231 aa19.71■□□□□ 0.75
APP-202ENST00000348990 ZNF473Q8WTR7 871 aaKnown RBP19.71■□□□□ 0.75
APP-202ENST00000348990 MTMR8Q96EF0 704 aa19.71■□□□□ 0.75
APP-202ENST00000348990 TTYH3Q9C0H2 523 aa19.71■□□□□ 0.75
APP-202ENST00000348990 CPVLQ9H3G5 476 aa19.71■□□□□ 0.75
APP-202ENST00000348990 SALL4Q9UJQ4 1053 aa19.71■□□□□ 0.75
APP-202ENST00000348990 PCDHA4Q9UN74 947 aa19.71■□□□□ 0.75
APP-202ENST00000348990 PLAGL2Q9UPG8 496 aa19.71■□□□□ 0.75
APP-202ENST00000348990 PPP1R37O75864 691 aa19.7■□□□□ 0.74
APP-202ENST00000348990 SWT1Q5T5J6 900 aaKnown RBP19.7■□□□□ 0.74
APP-202ENST00000348990 FAM170AA1A519 330 aa19.7■□□□□ 0.74
APP-202ENST00000348990 A6NNZ2 444 aa19.7■□□□□ 0.74
APP-202ENST00000348990 GOLGA8HP0CJ92 632 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms