RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 ADGRL3Q9HAR2 1447 aa20.43■□□□□ 0.86
UBE3C-201ENST00000348165 GOLGA6CA6NDK9 693 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 H0YCG3 227 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 MMP1P03956 469 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 GOLGA6DP0CG33 693 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 ITIH3Q06033 890 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 SUPT20HL1Q3ZLR7 823 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 GAS2L3Q86XJ1 694 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 TRIM58Q8NG06 486 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 GOLGA6AQ9NYA3 693 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 GOLGA6BA6NDN3 693 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 CUL4AQ13619 759 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 SEPT9Q9UHD8 586 aaPredicted RBP20.42■□□□□ 0.86
UBE3C-201ENST00000348165 LINC00301Q8NCQ3 95 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
UBE3C-201ENST00000348165 TUBGCP2Q9BSJ2 902 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 C21orf2O43822 256 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 HSPA1LP34931 641 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 COPB1P53618 953 aaKnown RBP20.42■□□□□ 0.86
UBE3C-201ENST00000348165 SEPT14Q6ZU15 432 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 CCDC89Q8N998 374 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 CNOT6LQ96LI5 555 aaKnown RBP20.42■□□□□ 0.86
UBE3C-201ENST00000348165 PPP2R2CQ9Y2T4 447 aa20.42■□□□□ 0.86
UBE3C-201ENST00000348165 CDK8P49336 464 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 DPCR1Q3MIW9 517 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 MRFAP1L1Q96HT8 127 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 MEIS1O00470 390 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 LAD1O00515 517 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 NDUFAB1O14561 156 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 STAT2P52630 851 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 N4BP1O75113 896 aaKnown RBP20.41■□□□□ 0.86
UBE3C-201ENST00000348165 VPS41P49754 854 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 EXOC3L4Q17RC7 722 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 INTS8Q75QN2 995 aaKnown RBP20.41■□□□□ 0.86
UBE3C-201ENST00000348165 MAP3K4Q9Y6R4 1608 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 ABCC3O15438 1527 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 H2AFZP0C0S5 128 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 NR2F2P24468 414 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 PRDX5P30044 214 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 PTPN21Q16825 1174 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 H2AFVQ71UI9 128 aa20.41■□□□□ 0.86
UBE3C-201ENST00000348165 MED10Q9BTT4 135 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 COA1Q9GZY4 146 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 USP14P54578 494 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 UBE2SQ16763 222 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 EEPD1Q7L9B9 569 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 ADAT2Q7Z6V5 191 aaKnown RBP20.4■□□□□ 0.86
UBE3C-201ENST00000348165 ATP6V0A1Q93050 837 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 KRT15P19012 456 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 LIFRP42702 1097 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 SF3A3Q12874 501 aaKnown RBP eCLIP20.4■□□□□ 0.863e-6■■■■■ 42.9
UBE3C-201ENST00000348165 KIF22Q14807 665 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 FAM160B1Q5W0V3 765 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 RUFY4Q6ZNE9 571 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 TTLL6Q8N841 843 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 APOL6Q9BWW8 343 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 ABL1P00519 1130 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 SLC7A3Q8WY07 619 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 LRRC8AQ8IWT6 810 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 NSMCE1Q8WV22 266 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 FAM184BQ9ULE4 1060 aa20.4■□□□□ 0.86
UBE3C-201ENST00000348165 PDE6CP51160 858 aa20.39■□□□□ 0.86
UBE3C-201ENST00000348165 GABPAQ06546 454 aa20.39■□□□□ 0.86
UBE3C-201ENST00000348165 IFRD2Q12894 506 aaPredicted RBP20.39■□□□□ 0.86
UBE3C-201ENST00000348165 RCOR1Q9UKL0 485 aa20.39■□□□□ 0.86
UBE3C-201ENST00000348165 KIF1BO60333 1816 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 CAPN9O14815 690 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 CASP14P31944 242 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 PPP2R5CQ13362 524 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 AK8Q96MA6 479 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 HESX1Q9UBX0 185 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 FEZ2Q9UHY8 353 aaPredicted RBP20.39■□□□□ 0.85
UBE3C-201ENST00000348165 EPN1Q9Y6I3 576 aaPredicted RBP20.39■□□□□ 0.85
UBE3C-201ENST00000348165 SYDE2Q5VT97 1194 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 CIAPIN1Q6FI81 312 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 CUEDC2Q9H467 287 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 PCDHB6Q9Y5E3 794 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 ZCCHC11Q5TAX3 1644 aaKnown RBP20.39■□□□□ 0.85
UBE3C-201ENST00000348165 PRPF3O43395 683 aaKnown RBP20.39■□□□□ 0.85
UBE3C-201ENST00000348165 GCFC2P16383 781 aaKnown RBP20.39■□□□□ 0.85
UBE3C-201ENST00000348165 CCNA1P78396 465 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 KRT71Q3SY84 523 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 VPS37BQ9H9H4 285 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 MAGEF1Q9HAY2 307 aa20.39■□□□□ 0.85
UBE3C-201ENST00000348165 INO80B-WBP1J3KQ70 363 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 TBC1D8O95759 1140 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
UBE3C-201ENST00000348165 CCT6BQ92526 530 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 MASTLQ96GX5 879 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 INO80BQ9C086 356 aaPredicted RBP20.38■□□□□ 0.85
UBE3C-201ENST00000348165 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 MINPP1Q9UNW1 487 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 KRIT1O00522 736 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 CRCPO75575 148 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 GUCY2FP51841 1108 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 LACTBP83111 547 aaPredicted RBP20.38■□□□□ 0.85
UBE3C-201ENST00000348165 TSC1Q92574 1164 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 HAUS4Q9H6D7 363 aa20.38■□□□□ 0.85
UBE3C-201ENST00000348165 CYP2D6P10635 497 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms