RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 IKZF4Q9H2S9 585 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 TCP11L1Q9NUJ3 509 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 USP21Q9UK80 565 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 DAGLAQ9Y4D2 1042 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 ITIH6Q6UXX5 1313 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 CCDC194A0A1B0GVG4 234 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 TRAPPC10P48553 1259 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 NOVP48745 357 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 NAPAP54920 295 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 GTF2IP78347 998 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 DOK7Q18PE1 504 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 PPFIBP1Q86W92 1011 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 TEX2Q8IWB9 1127 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 GSPT2Q8IYD1 628 aaKnown RBP6.79□□□□□ -1.32
CLCN3-201ENST00000347613 TEX11Q8IYF3 940 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 CNBD1Q8NA66 436 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MNS1Q8NEH6 495 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 HAS1Q92839 578 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 GDAP1L1Q96MZ0 367 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 MMS19Q96T76 1030 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 GPCPD1Q9NPB8 672 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 DACH1Q9UI36 760 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 GUCA1BQ9UMX6 200 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 SCN9AQ15858 1988 aa6.79□□□□□ -1.32
CLCN3-201ENST00000347613 FAM170AA1A519 330 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 NDUFA10O95299 355 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 GABPAQ06546 454 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 BEND6Q5SZJ8 279 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-201ENST00000347613 CABP7Q86V35 215 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 DAGLBQ8NCG7 672 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 BRMS1Q9HCU9 246 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 ABCB6Q9NP58 842 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 MYH4Q9Y623 1939 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 SERPINB2P05120 415 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 EZH2Q15910 746 aaKnown RBP6.78□□□□□ -1.32
CLCN3-201ENST00000347613 CCDC178Q5BJE1 867 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 KCTD1Q719H9 257 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 SIAH1Q8IUQ4 282 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 NEK11Q8NG66 645 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 NEDD1Q8NHV4 660 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 DNAJC7Q99615 494 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 CCSER1Q9C0I3 900 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 SH3GLB2Q9NR46 395 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 EPN1Q9Y6I3 576 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-201ENST00000347613 NRXN2Q9P2S2 1712 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 LRRIQ3A6PVS8 624 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-201ENST00000347613 LGALS16A8MUM7 142 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 PES1O00541 588 aaKnown RBP6.78□□□□□ -1.32
CLCN3-201ENST00000347613 PDE4DQ08499 809 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 LONRF2Q1L5Z9 754 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 SRGAP1Q7Z6B7 1085 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 WDR66Q8TBY9 1149 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 HDAC7Q8WUI4 952 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 TUBGCP2Q9BSJ2 902 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 RIOX1Q9H6W3 641 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 JMJD4Q9H9V9 463 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 CDC23Q9UJX2 597 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 LEMD3Q9Y2U8 911 aa6.78□□□□□ -1.32
CLCN3-201ENST00000347613 IGKV6D-41A0A0C4DH26 115 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 USP17L10C9JJH3 530 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 MAP2K7O14733 419 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 KIF5BP33176 963 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 TXLNAP40222 546 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 UBA7P41226 1012 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 CHMP4BP1P59074 171 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 RAD51AP2Q09MP3 1159 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 RRP1BQ14684 758 aaKnown RBP6.77□□□□□ -1.32
CLCN3-201ENST00000347613 DPP8Q6V1X1 898 aaPredicted RBP6.77□□□□□ -1.32
CLCN3-201ENST00000347613 ZNF771Q7L3S4 317 aaPredicted RBP6.77□□□□□ -1.32
CLCN3-201ENST00000347613 TMC4Q7Z404 712 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 PIAS4Q8N2W9 510 aaPredicted RBP6.77□□□□□ -1.32
CLCN3-201ENST00000347613 MTMR4Q9NYA4 1195 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 TBC1D7Q9P0N9 293 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 ARHGAP20Q9P2F6 1191 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 CAPN11Q9UMQ6 739 aa6.77□□□□□ -1.32
CLCN3-201ENST00000347613 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L19D6RCP7 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L20D6RJB6 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 POLRMTO00411 1230 aaKnown RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 OR52Z1P0C646 297 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 SRGNP10124 158 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 OAS2P29728 719 aaKnown RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 SHMT1P34896 483 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L24Q0WX57 530 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 KCNMA1Q12791 1236 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 USP17L6PQ6QN14 398 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 ADGRF4Q8IZF3 695 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 CAPZA3Q96KX2 299 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 CNOT6LQ96LI5 555 aaKnown RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 SPZ1Q9BXG8 430 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 ZNF646O15015 1829 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 GAKO14976 1311 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 CEP350Q5VT06 3117 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 H7C1D1 291 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms