RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CALCOCO2Q13137 446 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 SYNE4Q8N205 404 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 UTP11Q9Y3A2 253 aaKnown RBP17■□□□□ 0.31
SRPK1-201ENST00000346162 FHOD1Q9Y613 1164 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 OVOS2A0A0J9YW53 1432 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 OVOS2Q6IE36 1432 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 OPHN1O60890 802 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 GGCXP38435 758 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 PHLDB3Q6NSJ2 640 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 LRRC47Q8N1G4 583 aaKnown RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 MGARPQ8TDB4 240 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 GJB4Q9NTQ9 266 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 LARSQ9P2J5 1176 aaKnown RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 TRAPPC10P48553 1259 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 PRPF38AQ8NAV1 312 aaKnown RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 EPN1Q9Y6I3 576 aaPredicted RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 CPS1P31327 1500 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 DLC1Q96QB1 1528 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 ARHGEF35A5YM69 484 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 CALUO43852 315 aaPredicted RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 PPFIA2O75334 1257 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 CFBP00751 764 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 ERCC5P28715 1186 aaPredicted RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 ASIC2Q16515 512 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 CCHCR1Q8TD31 782 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 FAM167BQ9BTA0 163 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 PLCB1Q9NQ66 1216 aa16.99■□□□□ 0.31
SRPK1-201ENST00000346162 FRMPD2Q68DX3 1309 aaPredicted RBP16.99■□□□□ 0.31
SRPK1-201ENST00000346162 SNAP23O00161 211 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 RGS16O15492 202 aaPredicted RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 CEP104O60308 925 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 DNM2P50570 870 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 NLRC4Q9NPP4 1024 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 LEMD3Q9Y2U8 911 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 RWDD2BP57060 319 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 GUCY2DQ02846 1103 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 RRAGAQ7L523 313 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 PPP1R14CQ8TAE6 165 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 SYNCQ9H7C4 482 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 TCP1P17987 556 aaKnown RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 IQCGQ9H095 443 aaKnown RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 PCDHA12Q9UN75 941 aa16.98■□□□□ 0.31
SRPK1-201ENST00000346162 SOS2Q07890 1332 aaPredicted RBP16.98■□□□□ 0.31
SRPK1-201ENST00000346162 SLC30A9Q6PML9 568 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 C2CD5Q86YS7 1000 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 IFIH1Q9BYX4 1025 aaKnown RBP16.97■□□□□ 0.31
SRPK1-201ENST00000346162 PSTPIP2Q9H939 334 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 XDHP47989 1333 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 MEFVO15553 781 aaPredicted RBP16.97■□□□□ 0.31
SRPK1-201ENST00000346162 KLHL30Q0D2K2 578 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
SRPK1-201ENST00000346162 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 HYOU1Q9Y4L1 999 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 NRXN1Q9ULB1 1477 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 ATP1A3P13637 1013 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 TNFAIP3P21580 790 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 SCP2P22307 547 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 GJC1P36383 396 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 TYW1BQ6NUM6 668 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 PACS2Q86VP3 889 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 WHAMMQ8TF30 809 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 BATF3Q9NR55 127 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 ATP2A1O14983 1001 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
SRPK1-201ENST00000346162 RASGRP4Q8TDF6 673 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 EEF2KMTQ96G04 330 aa16.97■□□□□ 0.31
SRPK1-201ENST00000346162 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
SRPK1-201ENST00000346162 SCNN1DP51172 638 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 GRAMD1CQ8IYS0 662 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 LARGE2Q8N3Y3 721 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 IQCDQ96DY2 449 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 FAF1Q9UNN5 650 aaPredicted RBP16.96■□□□□ 0.31
SRPK1-201ENST00000346162 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.31
SRPK1-201ENST00000346162 CASP14P31944 242 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 VSTM4Q8IW00 320 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 MYOCDQ8IZQ8 938 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 IQGAP1P46940 1657 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 SOWAHDA6NJG2 315 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 H2AFXP16104 143 aaPredicted RBP16.96■□□□□ 0.31
SRPK1-201ENST00000346162 ALS2CLQ60I27 953 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 ARHGAP24Q8N264 748 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 MYCT1Q8N699 235 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 HOMER3Q9NSC5 361 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 RFX7Q2KHR2 1363 aa16.96■□□□□ 0.31
SRPK1-201ENST00000346162 CTNND1O60716 968 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms