RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 MOXD2PA6NHM9 499 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 IFIT3O14879 490 aaKnown RBP16.85■□□□□ 0.29
HMGN3-202ENST00000344726 ASGR1P07306 291 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 SMPD1P17405 629 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 ALDH5A1P51649 535 aaPredicted RBP16.85■□□□□ 0.29
HMGN3-202ENST00000344726 NKX3-2P78367 333 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 BEX3Q00994 111 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 SLC35G1Q2M3R5 365 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
HMGN3-202ENST00000344726 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 MAD2L2Q9UI95 211 aa16.85■□□□□ 0.29
HMGN3-202ENST00000344726 SLC27A2O14975 620 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 PQBP1O60828 265 aaKnown RBP16.84■□□□□ 0.29
HMGN3-202ENST00000344726 CALML3P27482 149 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 BADQ92934 168 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
HMGN3-202ENST00000344726 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
HMGN3-202ENST00000344726 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-202ENST00000344726 CLTBP09497 229 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.28
HMGN3-202ENST00000344726 FAAP100Q0VG06 881 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 ANKRD33Q7Z3H0 272 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 TBC1D5Q92609 795 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 LBHD1Q9BQE6 289 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-202ENST00000344726 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 PRKAG2Q9UGJ0 569 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 PNMA2Q9UL42 364 aa16.83■□□□□ 0.28
HMGN3-202ENST00000344726 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 CDK7P50613 346 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 TROAPQ12815 778 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 GRM4Q14833 912 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 WTAPQ15007 396 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 C9orf50Q5SZB4 431 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 MTMR8Q96EF0 704 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
HMGN3-202ENST00000344726 ELP1O95163 1332 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 ERICH2A1L162 156 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 KIAA0355O15063 1070 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
HMGN3-202ENST00000344726 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
HMGN3-202ENST00000344726 EDNRBP24530 442 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 EPHB4P54760 987 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 Q7L0L9 218 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
HMGN3-202ENST00000344726 NUP133Q8WUM0 1156 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 LY9Q9HBG7 655 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 COL20A1Q9P218 1284 aa16.81■□□□□ 0.28
HMGN3-202ENST00000344726 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
HMGN3-202ENST00000344726 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 ABCB11O95342 1321 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 OPLAHO14841 1288 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-202ENST00000344726 PRC1O43663 620 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 CYTH3O43739 400 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 CDC45O75419 566 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
HMGN3-202ENST00000344726 SHHQ15465 462 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
HMGN3-202ENST00000344726 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 GLT1D1Q96MS3 346 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 TOX2Q96NM4 488 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
HMGN3-202ENST00000344726 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
HMGN3-202ENST00000344726 FSCN1Q16658 493 aaKnown RBP16.79■□□□□ 0.28
HMGN3-202ENST00000344726 IQSEC1Q6DN90 963 aa16.79■□□□□ 0.28
HMGN3-202ENST00000344726 MYL10Q9BUA6 226 aa16.79■□□□□ 0.28
HMGN3-202ENST00000344726 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
HMGN3-202ENST00000344726 TMEM39AQ9NV64 488 aa16.79■□□□□ 0.28
HMGN3-202ENST00000344726 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
HMGN3-202ENST00000344726 LOC102724159A0A0B4J2E5 919 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-202ENST00000344726 ARVCFO00192 962 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-202ENST00000344726 ZBTB5O15062 677 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 PWP2Q15269 919 aaKnown RBP16.78■□□□□ 0.28
HMGN3-202ENST00000344726 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 FAM126BQ8IXS8 530 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 SLC43A3Q8NBI5 491 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 DNERQ8NFT8 737 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-202ENST00000344726 PIGSQ96S52 555 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 AMNQ9BXJ7 453 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 COL6A3P12111 3177 aa16.78■□□□□ 0.28
HMGN3-202ENST00000344726 MYH7BA7E2Y1 1941 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms