RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 TLE2Q04725 743 aa23.34■■□□□ 1.33
CEACAM3-201ENST00000344550 WTAPQ15007 396 aa23.34■■□□□ 1.33
CEACAM3-201ENST00000344550 FBXO11Q86XK2 927 aa23.34■■□□□ 1.33
CEACAM3-201ENST00000344550 LENG1Q96BZ8 264 aaPredicted RBP23.34■■□□□ 1.33
CEACAM3-201ENST00000344550 AMNQ9BXJ7 453 aa23.34■■□□□ 1.33
CEACAM3-201ENST00000344550 LSG1Q9H089 658 aaKnown RBP23.34■■□□□ 1.33
CEACAM3-201ENST00000344550 DHX16O60231 1041 aaKnown RBP23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 ASGR1P07306 291 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 CALML3P27482 149 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 GHRHRQ02643 423 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 GRM4Q14833 912 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 QRICH1Q2TAL8 776 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 DUSP28Q4G0W2 176 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 CASC1Q6TDU7 716 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 SLC30A10Q6XR72 485 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 MB21D2Q8IYB1 491 aaPredicted RBP23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 MAD2L2Q9UI95 211 aa23.33■■□□□ 1.33
CEACAM3-201ENST00000344550 DCDC2CA8MYV0 355 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 NKRFO15226 690 aaKnown RBP eCLIP23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 CTAGE5O15320 804 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 TROAPQ12815 778 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 USH1GQ495M9 461 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 STOX1Q6ZVD7 989 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 NOL8Q76FK4 1167 aaKnown RBP23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 CATIPQ7Z7H3 387 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 TLK2Q86UE8 772 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 IGDCC4Q8TDY8 1250 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 IWS1Q96ST2 819 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 PDLIM7Q9NR12 457 aa23.32■■□□□ 1.32
CEACAM3-201ENST00000344550 ZBTB5O15062 677 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 KIAA0355O15063 1070 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 CLTBP09497 229 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 SMPD1P17405 629 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 SMARCA1P28370 1054 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 MCM5P33992 734 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 CDK7P50613 346 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 PDE4DQ08499 809 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 NECTIN1Q15223 517 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 FSCN1Q16658 493 aaKnown RBP23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 TMEM67Q5HYA8 995 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 RNF20Q5VTR2 975 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 FBXO16Q8IX29 292 aaPredicted RBP23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 TMEM87BQ96K49 555 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 CPVLQ9H3G5 476 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 RIOX1Q9H6W3 641 aa23.31■■□□□ 1.32
CEACAM3-201ENST00000344550 LCTP09848 1927 aa23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 A0A0U1RQG5 324 aaPredicted RBP23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 MYADML2A6NDP7 307 aa23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 STAG2Q8N3U4 1231 aa23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 NSUN6Q8TEA1 469 aaKnown RBP23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 SCFD2Q8WU76 684 aa23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 WDR11Q9BZH6 1224 aa23.3■■□□□ 1.32
CEACAM3-201ENST00000344550 LRRC37A2A6NM11 1700 aa23.29■■□□□ 1.32
CEACAM3-201ENST00000344550 MDM2Q00987 491 aaPredicted RBP23.29■■□□□ 1.32
CEACAM3-201ENST00000344550 PURBQ96QR8 312 aaKnown RBP23.29■■□□□ 1.32
CEACAM3-201ENST00000344550 VAT1LQ9HCJ6 419 aa23.29■■□□□ 1.32
CEACAM3-201ENST00000344550 PDGFCQ9NRA1 345 aa23.29■■□□□ 1.32
CEACAM3-201ENST00000344550 TAF6LQ9Y6J9 622 aa23.29■■□□□ 1.32
CEACAM3-201ENST00000344550 ARVCFO00192 962 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 SLC27A2O14975 620 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 DYNC1LI2O43237 492 aaPredicted RBP23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 DDAH1O94760 285 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 KIF5BP33176 963 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 LIFRP42702 1097 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 ANTXR2P58335 489 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 BRDTQ58F21 947 aaPredicted RBP23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 EEPD1Q7L9B9 569 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 SYTL5Q8TDW5 730 aaPredicted RBP23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 CCDC136Q96JN2 1154 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 LZTS2Q9BRK4 669 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 ANO2Q9NQ90 1003 aa23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 PRDM5Q9NQX1 630 aaPredicted RBP23.28■■□□□ 1.32
CEACAM3-201ENST00000344550 KPNA6O60684 536 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 PQBP1O60828 265 aaKnown RBP23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 GNAQP50148 359 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 CPT1AP50416 773 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 HSD17B4P51659 736 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 CREB3L3Q68CJ9 461 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 SLC43A3Q8NBI5 491 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 VTI1AQ96AJ9 217 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 PCDHA1Q9Y5I3 950 aa23.27■■□□□ 1.32
CEACAM3-201ENST00000344550 PNMA6FA0A0J9YX94 578 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 TRIM43BA6NCK2 446 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 CDC45O75419 566 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 CALM1P0DP23 149 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 CALM2P0DP24 149 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 CALM3P0DP25 149 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 FAAP100Q0VG06 881 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 TSGA10IPQ3SY00 556 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 RMDN3Q96TC7 470 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 LY9Q9HBG7 655 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 TMEM39AQ9NV64 488 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 POLR3EQ9NVU0 708 aa23.26■■□□□ 1.31
CEACAM3-201ENST00000344550 TLR3O15455 904 aaKnown RBP23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 PRC1O43663 620 aa23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 TTLL4Q14679 1199 aa23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 PPP2R5BQ15173 497 aa23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 STXBP2Q15833 593 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms