RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KLHDC9Q8NEP7 349 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 SENP2Q9HC62 589 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 CCDC69A6NI79 296 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 ADCY6O43306 1168 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 DDAH1O94760 285 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 KIF5BP33176 963 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 ACLYP53396 1101 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 C1orf53Q5VUE5 145 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 CTCFLQ8NI51 663 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-201ENST00000344376 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 LY9Q9HBG7 655 aa18.68■□□□□ 0.58
ATG4B-201ENST00000344376 A0A1W2PPC1 479 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 KCNA10Q16322 511 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 TRIM60Q495X7 471 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 TLK2Q86UE8 772 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 HOMER1Q86YM7 354 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 ZNF654Q8IZM8 581 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 MTMR8Q96EF0 704 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 GLT1D1Q96MS3 346 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 PRO3102Q9H379 93 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 STARD7Q9NQZ5 370 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 DDX49Q9Y6V7 483 aaKnown RBP18.67■□□□□ 0.58
ATG4B-201ENST00000344376 SMCHD1A6NHR9 2005 aa18.67■□□□□ 0.58
ATG4B-201ENST00000344376 MCM3APO60318 1980 aa18.66■□□□□ 0.58
ATG4B-201ENST00000344376 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-201ENST00000344376 SH2B2O14492 632 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-201ENST00000344376 MAGEA10P43363 369 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-201ENST00000344376 TAPT1Q6NXT6 567 aa18.66■□□□□ 0.58
ATG4B-201ENST00000344376 GDF15Q99988 308 aa18.66■□□□□ 0.58
ATG4B-201ENST00000344376 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-201ENST00000344376 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
ATG4B-201ENST00000344376 PCDHA1Q9Y5I3 950 aa18.66■□□□□ 0.58
ATG4B-201ENST00000344376 LRRC37A2A6NM11 1700 aa18.66■□□□□ 0.58
ATG4B-201ENST00000344376 MYADML2A6NDP7 307 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 SMPD1P17405 629 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 BMP8BP34820 402 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 LIFRP42702 1097 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 ERICH6BQ5W0A0 696 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 CCSAPQ6IQ19 270 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-201ENST00000344376 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-201ENST00000344376 PDGFCQ9NRA1 345 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 GNEQ9Y223 722 aaKnown RBP18.65■□□□□ 0.58
ATG4B-201ENST00000344376 Q9Y3F1 56 aa18.65■□□□□ 0.58
ATG4B-201ENST00000344376 ZEB2O60315 1214 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 ASGR1P07306 291 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 CALM1P0DP23 149 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 CALM2P0DP24 149 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 CALM3P0DP25 149 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 EDNRBP24530 442 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 GNAQP50148 359 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 NKX3-2P78367 333 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 KRT32Q14532 448 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 SYTL5Q8TDW5 730 aaPredicted RBP18.64■□□□□ 0.58
ATG4B-201ENST00000344376 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.58
ATG4B-201ENST00000344376 VTI1AQ96AJ9 217 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 NEK1Q96PY6 1258 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 PIGSQ96S52 555 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 LZTS2Q9BRK4 669 aa18.64■□□□□ 0.58
ATG4B-201ENST00000344376 ELP1O95163 1332 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 LCTP09848 1927 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 PNMA6FA0A0J9YX94 578 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 DYNC1LI2O43237 492 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-201ENST00000344376 CFBP00751 764 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
ATG4B-201ENST00000344376 DUSP28Q4G0W2 176 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 MYL10Q9BUA6 226 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 GPHNQ9NQX3 736 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-201ENST00000344376 PPP4R2Q9NY27 417 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 SLC12A7Q9Y666 1083 aa18.64■□□□□ 0.57
ATG4B-201ENST00000344376 PQBP1O60828 265 aaKnown RBP18.63■□□□□ 0.57
ATG4B-201ENST00000344376 SLC34A2O95436 690 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 TLE2Q04725 743 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 PPP2R5BQ15173 497 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 SYNE3Q6ZMZ3 975 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 SAMD3Q8N6K7 520 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 SCFD2Q8WU76 684 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 TBC1D5Q92609 795 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 RMDN3Q96TC7 470 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 UBE2OQ9C0C9 1292 aaKnown RBP18.63■□□□□ 0.57
ATG4B-201ENST00000344376 MAP3K20Q9NYL2 800 aaKnown RBP18.63■□□□□ 0.57
ATG4B-201ENST00000344376 MROH7Q68CQ1 1323 aa18.63■□□□□ 0.57
ATG4B-201ENST00000344376 RBM47A0AV96 593 aaKnown RBP18.62■□□□□ 0.57
ATG4B-201ENST00000344376 PPP1R11O60927 126 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-201ENST00000344376 CABYRO75952 493 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 REC8O95072 547 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-201ENST00000344376 MDM2Q00987 491 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-201ENST00000344376 BEX3Q00994 111 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 ARHGEF16Q5VV41 709 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 RRP36Q96EU6 259 aaKnown RBP18.62■□□□□ 0.57
ATG4B-201ENST00000344376 TAAR1Q96RJ0 339 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 IWS1Q96ST2 819 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 SPZ1Q9BXG8 430 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 PDLIM7Q9NR12 457 aa18.62■□□□□ 0.57
ATG4B-201ENST00000344376 SEC63Q9UGP8 760 aaKnown RBP18.62■□□□□ 0.57
ATG4B-201ENST00000344376 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-201ENST00000344376 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms