RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 CASP10Q92851 521 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 NT5C3AQ9H0P0 336 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 CCDC61Q9Y6R9 512 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 CYB5D1Q6P9G0 228 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 TTLL7Q6ZT98 887 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 IFT122Q9HBG6 1241 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 C6orf50Q9HD87 102 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 TMED2Q15363 201 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 NUGGCQ68CJ6 796 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 OTUD6AQ7L8S5 288 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 ORC6Q9Y5N6 252 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 ESRRAP11474 423 aaPredicted RBP14.82□□□□□ -0.04
TRIO-202ENST00000344204 ABCC1P33527 1531 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 SFSWAPQ12872 951 aaKnown RBP14.82□□□□□ -0.04
TRIO-202ENST00000344204 GEN1Q17RS7 908 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 SESTD1Q86VW0 696 aa14.82□□□□□ -0.04
TRIO-202ENST00000344204 TRPM1Q7Z4N2 1603 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 KLHL23Q8NBE8 558 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 RCOR1Q9UKL0 485 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 KRT5P13647 590 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 MIEF2Q96C03 454 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 NR1H3Q13133 447 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 LSG1Q9H089 658 aaKnown RBP14.81□□□□□ -0.04
TRIO-202ENST00000344204 VAT1LQ9HCJ6 419 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 ZDHHC9Q9Y397 364 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 AP1G2O75843 785 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 CLIC4Q9Y696 253 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 B4DLN1 442 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 FAM107AO95990 144 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 ANO5Q75V66 913 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 DIS3L2Q8IYB7 885 aaKnown RBP14.81□□□□□ -0.04
TRIO-202ENST00000344204 PITPNM3Q9BZ71 974 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 SERPINB4P48594 390 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 PTPROQ16827 1216 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 NLRC4Q9NPP4 1024 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 CCT8L1PA6NM43 557 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 STK10O94804 968 aaKnown RBP14.81□□□□□ -0.04
TRIO-202ENST00000344204 SSX2IPQ9Y2D8 614 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 SHANK2Q9UPX8 1470 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 WDR75Q8IWA0 830 aaKnown RBP14.81□□□□□ -0.04
TRIO-202ENST00000344204 ZNF274Q96GC6 653 aaPredicted RBP14.81□□□□□ -0.04
TRIO-202ENST00000344204 TRAIPQ9BWF2 469 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 ZMYM6O95789 1325 aa14.81□□□□□ -0.04
TRIO-202ENST00000344204 HNRNPLLQ8WVV9 542 aaKnown RBP14.8□□□□□ -0.04
TRIO-202ENST00000344204 MOCS3O95396 460 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 MDH1P40925 334 aaKnown RBP14.8□□□□□ -0.04
TRIO-202ENST00000344204 IL15P40933 162 aaPredicted RBP14.8□□□□□ -0.04
TRIO-202ENST00000344204 C10orf76Q5T2E6 689 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 LRRC31Q6UY01 552 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 IMPG2Q9BZV3 1241 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 PLTPP55058 493 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 SERPINI1Q99574 410 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 PCDHA13Q9Y5I0 950 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 CDC42BPBQ9Y5S2 1711 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 ESRRBO95718 433 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 POLD1P28340 1107 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 DNAJC6O75061 913 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 DAB2IPQ5VWQ8 1189 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 CCZ1BP86790 482 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 CCZ1P86791 482 aaPredicted RBP14.8□□□□□ -0.04
TRIO-202ENST00000344204 SPARCL1Q14515 664 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 PCDHA5Q9Y5H7 936 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 PTPN21Q16825 1174 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 GJC2Q5T442 439 aaPredicted RBP14.8□□□□□ -0.04
TRIO-202ENST00000344204 CRNKL1Q9BZJ0 848 aaKnown RBP14.8□□□□□ -0.04
TRIO-202ENST00000344204 SRGAP2O75044 1071 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 AGGF1Q8N302 714 aaeCLIP14.8□□□□□ -0.047e-7■■■■□ 24.5
TRIO-202ENST00000344204 SEC16BQ96JE7 1060 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 HMGXB3Q12766 1538 aa14.8□□□□□ -0.04
TRIO-202ENST00000344204 PALM2Q8IXS6 379 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 TGS1Q96RS0 853 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 SLC52A1Q9NWF4 448 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 HNRNPCL1O60812 293 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 DZIP3Q86Y13 1208 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 NHEJ1Q9H9Q4 299 aaPredicted RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 SPC25Q9HBM1 224 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 MAN1B1Q9UKM7 699 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 SBNO2Q9Y2G9 1366 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 KPNB1Q14974 876 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 BSDC1Q9NW68 430 aaPredicted RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 GID8Q9NWU2 228 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 INPP1P49441 399 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 SLC9C2Q5TAH2 1124 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 TRPM8Q7Z2W7 1104 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRIO-202ENST00000344204 ICA1Q05084 483 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 KSR2Q6VAB6 950 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 UQCRFS1P1P0C7P4 283 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 NUDT16Q96DE0 195 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 UBAP1Q9NZ09 502 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 NCOA3Q9Y6Q9 1424 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 NXNQ6DKJ4 435 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 RSBN1LQ6PCB5 846 aaPredicted RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 SYT2Q8N9I0 419 aaPredicted RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 CATSPER2Q96P56 530 aa14.79□□□□□ -0.04
TRIO-202ENST00000344204 PABPN1LA6NDY0 278 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 LONP1P36776 959 aaKnown RBP14.79□□□□□ -0.04
TRIO-202ENST00000344204 MAML3Q96JK9 1138 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms