RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CPT1AP50416 773 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 NFIAQ12857 509 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 CNKSR3Q6P9H4 555 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 RASGRP4Q8TDF6 673 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 TTYH1Q9H313 450 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-202ENST00000343599 ZNF214Q9UL59 606 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-202ENST00000343599 COL4A2P08572 1712 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 USP17L12C9JPN9 530 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 USP17L21D6R901 530 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 GTF2A1P52655 376 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-202ENST00000343599 ACLYP53396 1101 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 PTK7Q13308 1070 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 PRPF38AQ8NAV1 312 aaKnown RBP8.5□□□□□ -1.05
ZNF540-202ENST00000343599 PUS3Q9BZE2 481 aaKnown RBP8.5□□□□□ -1.05
ZNF540-202ENST00000343599 CCDC172P0C7W6 258 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 SNHG28P0DPA3 235 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 SATB1Q01826 763 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 GRIK5Q16478 980 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 POTEEQ6S8J3 1075 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 SLC51AQ86UW1 340 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 CHURC1Q8WUH1 139 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 STAG1Q8WVM7 1258 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 SNX21Q969T3 373 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 AGBL1Q96MI9 1066 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 HAUS7Q99871 368 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
ZNF540-202ENST00000343599 FAM53CQ9NYF3 392 aa8.5□□□□□ -1.05
ZNF540-202ENST00000343599 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 CERKLQ49MI3 558 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 RSPO2Q6UXX9 243 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 ANKRD13CQ8N6S4 541 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 NOC4LQ9BVI4 516 aaKnown RBP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 ADD3Q9UEY8 706 aaKnown RBP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 SYNRGQ9UMZ2 1314 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 KDM3AQ9Y4C1 1321 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 PRDX5P30044 214 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 PHKA1P46020 1223 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 RARSP54136 660 aaKnown RBP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 COASYQ13057 564 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 ICE2Q659A1 982 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 HSCBQ8IWL3 235 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 MMP19Q99542 508 aa8.49□□□□□ -1.05
ZNF540-202ENST00000343599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.49□□□□□ -1.05
ZNF540-202ENST00000343599 ST18O60284 1047 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 FOSL2P15408 326 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 RFX1P22670 979 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 ICAM3P32942 547 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 MLLT6P55198 1093 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 NOLC1Q14978 699 aaKnown RBP eCLIP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 PTPROQ16827 1216 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 ZSCAN23Q3MJ62 389 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 NOL8Q76FK4 1167 aaKnown RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 MFSD14AQ96MC6 490 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 VWA5AO00534 786 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 EYA4O95677 639 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 IGHDP01880 384 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 TGFB3P10600 412 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 GUCY2CP25092 1073 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 SPP2Q13103 211 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 G3BP1Q13283 466 aaKnown RBP eCLIP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 PRAMEF18Q5VWM3 479 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 EP400NLQ6ZTU2 488 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 NPLOC4Q8TAT6 608 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 RSPH14Q9UHP6 348 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 DOCK3Q8IZD9 2030 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 TRIM43BA6NCK2 446 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 ZBED4O75132 1171 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 HMMRO75330 724 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 RAD51AP2Q09MP3 1159 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 DUSP28Q4G0W2 176 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 BRDTQ58F21 947 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 TRIM43Q96BQ3 446 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 SLF1Q9BQI6 1058 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 MTG1Q9BT17 334 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-202ENST00000343599 LRRCC1Q9C099 1032 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 STAP2Q9UGK3 403 aa8.48□□□□□ -1.05
ZNF540-202ENST00000343599 COL1A2P08123 1366 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 GOLGA6L22H0YM25 854 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 MARCH6O60337 910 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 CLSTN1O94985 981 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 ADORA2AP29274 412 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 CCND3P30281 292 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-202ENST00000343599 ADD2P35612 726 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 PARP9Q8IXQ6 854 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 KIF1BPQ96EK5 621 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 ZNF576Q9H609 170 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 DIAPH3Q9NSV4 1193 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 BTBD7Q9P203 1132 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 CYP2C8P10632 490 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 MTMR2Q13614 643 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 KIAA1958Q8N8K9 716 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 GIMAP8Q8ND71 665 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-202ENST00000343599 SSH1Q8WYL5 1049 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 MRRFQ96E11 262 aaKnown RBP8.47□□□□□ -1.05
ZNF540-202ENST00000343599 FGD4Q96M96 766 aa8.47□□□□□ -1.05
ZNF540-202ENST00000343599 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms