RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MTA3Q9BTC8 594 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.71□□□□□ -0.052e-9■■□□□ 13.6
COL18A1-201ENST00000342220 V9GYY5 206 aaPredicted RBP14.71□□□□□ -0.05
COL18A1-201ENST00000342220 SNED1Q8TER0 1413 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 MYO3BQ8WXR4 1341 aa14.71□□□□□ -0.05
COL18A1-201ENST00000342220 DDX39AO00148 427 aaKnown RBP14.71□□□□□ -0.06
COL18A1-201ENST00000342220 PEX10O60683 326 aa14.71□□□□□ -0.06
COL18A1-201ENST00000342220 TMC6Q7Z403 805 aa14.71□□□□□ -0.06
COL18A1-201ENST00000342220 ANKRD31Q8N7Z5 1873 aa14.71□□□□□ -0.06
COL18A1-201ENST00000342220 SYT17Q9BSW7 474 aa14.71□□□□□ -0.06
COL18A1-201ENST00000342220 FLOT1O75955 427 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 STAT6P42226 847 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 SYCP1Q15431 976 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 ZHX2Q9Y6X8 837 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 ALAS1P13196 640 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 HNRNPH2P55795 449 aaKnown RBP14.7□□□□□ -0.06
COL18A1-201ENST00000342220 GRM1Q13255 1194 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 ST7Q9NRC1 585 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 POTEMA6NI47 508 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 ENTPD3O75355 529 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 PRR16Q569H4 304 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 NSMFQ6X4W1 530 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 MOB2Q70IA6 237 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 FBXO11Q86XK2 927 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 AGBL3Q8NEM8 1001 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 SMARCE1Q969G3 411 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 FBXO2Q9UK22 296 aaPredicted RBP14.7□□□□□ -0.06
COL18A1-201ENST00000342220 ZNF215Q9UL58 517 aaPredicted RBP14.7□□□□□ -0.06
COL18A1-201ENST00000342220 CD2APQ9Y5K6 639 aa14.7□□□□□ -0.06
COL18A1-201ENST00000342220 SPDYE3A6NKU9 549 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 GSDMDP57764 484 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 NLRP12P59046 1061 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
COL18A1-201ENST00000342220 MTMR2Q13614 643 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 KIAA1755Q5JYT7 1200 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 GPATCH4Q5T3I0 446 aaKnown RBP14.69□□□□□ -0.06
COL18A1-201ENST00000342220 C9orf131Q5VYM1 1079 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 C10orf71Q711Q0 1435 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 CLGNO14967 610 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 PPP1R11O60927 126 aaPredicted RBP14.69□□□□□ -0.06
COL18A1-201ENST00000342220 PTPREP23469 700 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 MRPL12P52815 198 aaKnown RBP14.69□□□□□ -0.06
COL18A1-201ENST00000342220 NPY5RQ15761 445 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 NEK8Q86SG6 692 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 TCP11L1Q9NUJ3 509 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 MORC2Q9Y6X9 1032 aaPredicted RBP14.69□□□□□ -0.06
COL18A1-201ENST00000342220 DUOX1Q9NRD9 1551 aa14.69□□□□□ -0.06
COL18A1-201ENST00000342220 ZBTB5O15062 677 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 SERPINC1P01008 464 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 STAT2P52630 851 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 TNFAIP1Q13829 316 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 SYDE2Q5VT97 1194 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 ARMCX5Q6P1M9 558 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 DYMQ7RTS9 669 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 KIF18AQ8NI77 898 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 CUL5Q93034 780 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 LZTS2Q9BRK4 669 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 PICK1Q9NRD5 415 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 SCN9AQ15858 1988 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 PNMA6FA0A0J9YX94 578 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 PSEN1P49768 467 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 GTF2A1P52655 376 aaPredicted RBP14.68□□□□□ -0.06
COL18A1-201ENST00000342220 NCAPHQ15003 741 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 KRBA2Q6ZNG9 492 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 SIAH1Q8IUQ4 282 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 GMLQ99445 158 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 BMP2KQ9NSY1 1161 aaPredicted RBP14.68□□□□□ -0.06
COL18A1-201ENST00000342220 A0A087X0B3 334 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 HMGCS2P54868 508 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
COL18A1-201ENST00000342220 EP400NLQ6ZTU2 488 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 GPIHBP1Q8IV16 184 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 BPIFA3Q9BQP9 254 aa14.68□□□□□ -0.06
COL18A1-201ENST00000342220 GEMIN8Q9NWZ8 242 aaKnown RBP14.68□□□□□ -0.06
COL18A1-201ENST00000342220 HOOK1Q9UJC3 728 aaKnown RBP14.68□□□□□ -0.06
COL18A1-201ENST00000342220 LRRC37AA6NMS7 1700 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 ADM5C9JUS6 153 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 CYP4A11Q02928 519 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 POSTNQ15063 836 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 CALCRLQ16602 461 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 RRAGBQ5VZM2 374 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 E4F1Q66K89 784 aaPredicted RBP14.67□□□□□ -0.06
COL18A1-201ENST00000342220 SPZ1Q9BXG8 430 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 IMPACTQ9P2X3 320 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 PPP6R2O75170 966 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 CCDC34Q96HJ3 373 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 RAVER2Q9HCJ3 691 aaKnown RBP14.67□□□□□ -0.06
COL18A1-201ENST00000342220 PRR12Q9ULL5 1215 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 SRPRBQ9Y5M8 271 aaKnown RBP14.67□□□□□ -0.06
COL18A1-201ENST00000342220 CENPFP49454 3210 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 ATP1A3P13637 1013 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 RCAN1P53805 252 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 TMED8Q6PL24 325 aaPredicted RBP14.67□□□□□ -0.06
COL18A1-201ENST00000342220 METTL16Q86W50 562 aaKnown RBP14.67□□□□□ -0.06
COL18A1-201ENST00000342220 AGBL1Q96MI9 1066 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 GOPCQ9HD26 462 aa14.67□□□□□ -0.06
COL18A1-201ENST00000342220 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.67□□□□□ -0.06
COL18A1-201ENST00000342220 TBC1D7Q9P0N9 293 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms