RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 FAM71BQ8TC56 605 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 CCDC12Q8WUD4 166 aaPredicted RBP13.53□□□□□ -0.24
TMEM220-201ENST00000341871 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 TATDN2Q93075 761 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 TMEM260Q9NX78 707 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
TMEM220-201ENST00000341871 AFF2P51816 1311 aa13.52□□□□□ -0.24
TMEM220-201ENST00000341871 CBFA2T2O43439 604 aa13.52□□□□□ -0.24
TMEM220-201ENST00000341871 CYTH3O43739 400 aa13.52□□□□□ -0.24
TMEM220-201ENST00000341871 BRD3Q15059 726 aa13.52□□□□□ -0.24
TMEM220-201ENST00000341871 NPY5RQ15761 445 aa13.52□□□□□ -0.24
TMEM220-201ENST00000341871 SPTY2D1Q68D10 685 aaPredicted RBP13.52□□□□□ -0.24
TMEM220-201ENST00000341871 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 MFSD4BQ5TF39 518 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 WDR66Q8TBY9 1149 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
TMEM220-201ENST00000341871 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 KCNQ5Q9NR82 932 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 ANAPC4Q9UJX5 808 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 MYO6Q9UM54 1294 aa13.52□□□□□ -0.25
TMEM220-201ENST00000341871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
TMEM220-201ENST00000341871 XDHP47989 1333 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
TMEM220-201ENST00000341871 N4BP3O15049 544 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 TFRCP02786 760 aaKnown RBP13.51□□□□□ -0.25
TMEM220-201ENST00000341871 PYGLP06737 847 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CALM1P0DP23 149 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CALM2P0DP24 149 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CALM3P0DP25 149 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 UBA7P41226 1012 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 SNAP25P60880 206 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 SHROOM1Q2M3G4 852 aaPredicted RBP13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CCDC178Q5BJE1 867 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 PIGSQ96S52 555 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CICQ96RK0 1608 aaPredicted RBP13.51□□□□□ -0.25
TMEM220-201ENST00000341871 USP17L5A8MUK1 530 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 IKBKBO14920 756 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 TECP42680 631 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CHMP4BP1P59074 171 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 CASP8Q14790 479 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 SLC10A5Q5PT55 438 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 IGSF22Q8N9C0 903 aa13.51□□□□□ -0.25
TMEM220-201ENST00000341871 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
TMEM220-201ENST00000341871 MARCH6O60337 910 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 DDAH1O94760 285 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-201ENST00000341871 TXKP42681 527 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 CDK8P49336 464 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 PFKFB3Q16875 520 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-201ENST00000341871 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 OSBPL5Q9H0X9 879 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-201ENST00000341871 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 MYH7P12883 1935 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 PHLPP2Q6ZVD8 1323 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 USP4Q13107 963 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 MORC3Q14149 939 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 TFR2Q9UP52 801 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 PCNTO95613 3336 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 GYS1P13807 737 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 RPS6KA3P51812 740 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 RBL2Q08999 1139 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 KCNB1Q14721 858 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 DPP8Q6V1X1 898 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-201ENST00000341871 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
TMEM220-201ENST00000341871 EHD4Q9H223 541 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 TMEM165Q9HC07 324 aa13.5□□□□□ -0.25
TMEM220-201ENST00000341871 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 CASP14P31944 242 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 THEMIS2Q5TEJ8 643 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 SPECC1LQ69YQ0 1117 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 DTHD1Q6ZMT9 781 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 MLKLQ8NB16 471 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 NUP88Q99567 741 aaPredicted RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 MTRQ99707 1265 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 KLC4Q9NSK0 619 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 TTF2Q9UNY4 1162 aaKnown RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 TUBB4AP04350 444 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 RASA1P20936 1047 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 HSPA1LP34931 641 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 TNNI2P48788 182 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 RSRC1Q96IZ7 334 aaKnown RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 BPIFA3Q9BQP9 254 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
TMEM220-201ENST00000341871 POLD4Q9HCU8 107 aa13.49□□□□□ -0.25
TMEM220-201ENST00000341871 IMPACTQ9P2X3 320 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms