RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 RXRAP19793 462 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 MCM3P25205 808 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 ROR2Q01974 943 aaKnown RBP13.17□□□□□ -0.3
RTN3-203ENST00000341307 MYL5Q02045 173 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 GUCY1B3Q02153 619 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 XRCC4Q13426 336 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 FLAD1Q8NFF5 587 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
RTN3-203ENST00000341307 POLD4Q9HCU8 107 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 GOPCQ9HD26 462 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 DOCK2Q92608 1830 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 A0A1B0GUL6 1792 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 RNF8O76064 485 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
RTN3-203ENST00000341307 ATP1A2P50993 1020 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
RTN3-203ENST00000341307 MYLK4Q86YV6 388 aaPredicted RBP13.17□□□□□ -0.3
RTN3-203ENST00000341307 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
RTN3-203ENST00000341307 ZNF804BA4D1E1 1349 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 A0A1B0GVG6 124 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 A6NHS1 94 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 TM4SF1P30408 202 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 ANKRD20A8PQ5CZ79 823 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 TXNRD3Q86VQ6 643 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 FAM81AQ8TBF8 368 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 ZCWPW1Q9H0M4 648 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 NAPBQ9H115 298 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 GNAT1P11488 350 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 CYP7A1P22680 504 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 CD151P48509 253 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 SEC24CP53992 1094 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 GUCY1A3Q02108 690 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 PTGISQ16647 500 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 NLRP14Q86W24 1093 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 AENQ8WTP8 325 aaKnown RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 CUL5Q93034 780 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 RRP36Q96EU6 259 aaKnown RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 ZNF274Q96GC6 653 aaPredicted RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
RTN3-203ENST00000341307 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
RTN3-203ENST00000341307 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
RTN3-203ENST00000341307 FERP16591 822 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 MTHFD1LQ6UB35 978 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 MAF1Q9H063 256 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
RTN3-203ENST00000341307 ANP32DO95626 131 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 FDPSP14324 419 aaKnown RBP13.15□□□□□ -0.3
RTN3-203ENST00000341307 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
RTN3-203ENST00000341307 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 ARMCX6Q7L4S7 300 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 SLC16A10Q8TF71 515 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 MMS19Q96T76 1030 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 LLPHQ9BRT6 129 aaKnown RBP13.15□□□□□ -0.3
RTN3-203ENST00000341307 TMEM165Q9HC07 324 aa13.15□□□□□ -0.3
RTN3-203ENST00000341307 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
RTN3-203ENST00000341307 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 LIN7AO14910 233 aaPredicted RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 MYL1P05976 194 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 BLMHQ13867 455 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 RASGRP2Q7LDG7 609 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 ZNF384Q8TF68 577 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 POLRMTO00411 1230 aaKnown RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 KIF4AO95239 1232 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 SCTRP47872 440 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 DYNLL1P63167 89 aaKnown RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 ZBED6P86452 979 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 HSP90AA4PQ58FG1 418 aa13.14□□□□□ -0.31
RTN3-203ENST00000341307 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 GPR101Q96P66 508 aaPredicted RBP13.14□□□□□ -0.31
RTN3-203ENST00000341307 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms