RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 SLC5A4Q9NY91 659 aa19.3■□□□□ 0.68
SFN-201ENST00000339276 STXBP3O00186 592 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 CDKL5O76039 1030 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 CFBP00751 764 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 SCG2P13521 617 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 AKAP17AQ02040 695 aaKnown RBP19.29■□□□□ 0.68
SFN-201ENST00000339276 SSRP1Q08945 709 aaKnown RBP19.29■□□□□ 0.68
SFN-201ENST00000339276 TYW1BQ6NUM6 668 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 CCDC83Q8IWF9 413 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 TRIM22Q8IYM9 498 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 ZSCAN31Q96LW9 406 aaPredicted RBP19.29■□□□□ 0.68
SFN-201ENST00000339276 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
SFN-201ENST00000339276 DIS3Q9Y2L1 958 aaKnown RBP19.29■□□□□ 0.68
SFN-201ENST00000339276 ASTN1O14525 1302 aa19.29■□□□□ 0.68
SFN-201ENST00000339276 SOWAHBA6NEL2 793 aa19.28■□□□□ 0.68
SFN-201ENST00000339276 GHRHRQ02643 423 aa19.28■□□□□ 0.68
SFN-201ENST00000339276 TRIM32Q13049 653 aa19.28■□□□□ 0.68
SFN-201ENST00000339276 SH2B1Q9NRF2 756 aaPredicted RBP19.28■□□□□ 0.68
SFN-201ENST00000339276 BARHL2Q9NY43 387 aa19.28■□□□□ 0.68
SFN-201ENST00000339276 COL20A1Q9P218 1284 aa19.28■□□□□ 0.68
SFN-201ENST00000339276 CENPFP49454 3210 aa19.28■□□□□ 0.68
SFN-201ENST00000339276 hCG_1984214I3L0E3 225 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 IGHA2P01877 340 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 HMGCRP04035 888 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 INHAP05111 366 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 HOXA13P31271 388 aaPredicted RBP19.27■□□□□ 0.68
SFN-201ENST00000339276 HSD17B4P51659 736 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 NAPAP54920 295 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 OLFML2BQ68BL8 750 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 TRMT44Q8IYL2 757 aaKnown RBP19.27■□□□□ 0.68
SFN-201ENST00000339276 ZNF713Q8N859 430 aaPredicted RBP19.27■□□□□ 0.68
SFN-201ENST00000339276 NSUN7Q8NE18 718 aaKnown RBP19.27■□□□□ 0.68
SFN-201ENST00000339276 SYTL5Q8TDW5 730 aaPredicted RBP19.27■□□□□ 0.68
SFN-201ENST00000339276 BIN2Q9UBW5 565 aaPredicted RBP19.27■□□□□ 0.68
SFN-201ENST00000339276 STK36Q9NRP7 1315 aa19.27■□□□□ 0.68
SFN-201ENST00000339276 JAK2O60674 1132 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 DEXIO95424 95 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 CYP2C19P33261 490 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 MCM2P49736 904 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 PPP1R18Q6NYC8 613 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 TNS4Q8IZW8 715 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 SHISA4Q96DD7 197 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 TMX3Q96JJ7 454 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 AIFM3Q96NN9 605 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 MAF1Q9H063 256 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
SFN-201ENST00000339276 MCM3APO60318 1980 aa19.26■□□□□ 0.67
SFN-201ENST00000339276 GCOM1H8Y6P7 765 aaPredicted RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 POLR2MP0CAP2 368 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 USP17L6PQ6QN14 398 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 ZNF467Q7Z7K2 595 aaPredicted RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 ARMC5Q96C12 935 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 TAAR1Q96RJ0 339 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 TINF2Q9BSI4 451 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 PSTPIP2Q9H939 334 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 MEIS2O14770 477 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 MYCP01106 439 aaPredicted RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 PRKAR2AP13861 404 aaKnown RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 FDPSP14324 419 aaKnown RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 ALDH5A1P51649 535 aaPredicted RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 UBE2SQ16763 222 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 MFSD14CQ5VZR4 134 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 SAMD3Q8N6K7 520 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 ZNF333Q96JL9 665 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 VPS54Q9P1Q0 977 aa19.25■□□□□ 0.67
SFN-201ENST00000339276 ORC3Q9UBD5 711 aaPredicted RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 ADD3Q9UEY8 706 aaKnown RBP19.25■□□□□ 0.67
SFN-201ENST00000339276 SMCO2A6NFE2 343 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 UBXN2AP68543 259 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 CACNB2Q08289 660 aaPredicted RBP19.24■□□□□ 0.67
SFN-201ENST00000339276 MAP3K21Q5TCX8 1036 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 MAMDC4Q6UXC1 1216 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 ARMCX2Q7L311 632 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 CUL5Q93034 780 aa19.24■□□□□ 0.67
SFN-201ENST00000339276 MAP3K20Q9NYL2 800 aaKnown RBP19.24■□□□□ 0.67
SFN-201ENST00000339276 SYNGAP1Q96PV0 1343 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 PIK3CDO00329 1044 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 SNAI1O95863 264 aaPredicted RBP19.23■□□□□ 0.67
SFN-201ENST00000339276 ADCY7P51828 1080 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 MTFR1Q15390 333 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 PRAMEF19Q5SWL8 479 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 MSL3Q8N5Y2 521 aaKnown RBP19.23■□□□□ 0.67
SFN-201ENST00000339276 DNERQ8NFT8 737 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 SMARCC2Q8TAQ2 1214 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 CCDC12Q8WUD4 166 aaPredicted RBP19.23■□□□□ 0.67
SFN-201ENST00000339276 ABHD8Q96I13 439 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 RMDN3Q96TC7 470 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 LLPHQ9BRT6 129 aaKnown RBP19.23■□□□□ 0.67
SFN-201ENST00000339276 RIC8AQ9NPQ8 531 aa19.23■□□□□ 0.67
SFN-201ENST00000339276 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.23■□□□□ 0.67
SFN-201ENST00000339276 ESYT2A0FGR8 921 aa19.22■□□□□ 0.67
SFN-201ENST00000339276 ASB14A6NK59 587 aa19.22■□□□□ 0.67
SFN-201ENST00000339276 ADAMTS3O15072 1205 aa19.22■□□□□ 0.67
SFN-201ENST00000339276 CYBAP13498 195 aa19.22■□□□□ 0.67
SFN-201ENST00000339276 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
SFN-201ENST00000339276 TRPV1Q8NER1 839 aa19.22■□□□□ 0.67
SFN-201ENST00000339276 CCDC148Q8NFR7 591 aa19.22■□□□□ 0.67
SFN-201ENST00000339276 ZMYND12Q9H0C1 365 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms