RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 TRMT1Q9NXH9 659 aaKnown RBP18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 MRPL12P52815 198 aaKnown RBP18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 CXCL9Q07325 125 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 ORC2Q13416 577 aaPredicted RBP18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 ZNRF3Q9ULT6 936 aa18.31■□□□□ 0.52
SCNN1A-202ENST00000338748 A0A1B0GTH6 734 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 GRB10Q13322 594 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 E4F1Q66K89 784 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 NIM1KQ8IY84 436 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 FAM151AQ8WW52 585 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 HAS1Q92839 578 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 TRIM49BA6NDI0 452 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 PAK1Q13153 545 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 TBX2Q13207 712 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 NR1I3Q14994 352 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 TPD52L1Q16890 204 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 USH1GQ495M9 461 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 PPP4R3AQ6IN85 833 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 NELFBQ8WX92 580 aa18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 DDX25Q9UHL0 483 aaKnown RBP18.3■□□□□ 0.52
SCNN1A-202ENST00000338748 MEIS2O14770 477 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 PMS1P54277 932 aaKnown RBP18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 IKQ13123 557 aaPredicted RBP18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 DHX8Q14562 1220 aaKnown RBP18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 NBPF9Q3BBW0 867 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 MIGA2Q7L4E1 593 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 PNMA5Q96PV4 448 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 RMND1Q9NWS8 449 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 LRWD1Q9UFC0 647 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 RWDD2AQ9UIY3 292 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 TPM2P07951 284 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 BMP3P12645 472 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 SYDE2Q5VT97 1194 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 BLOC1S4Q9NUP1 217 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 ADD3Q9UEY8 706 aaKnown RBP18.29■□□□□ 0.52
SCNN1A-202ENST00000338748 EGFRP00533 1210 aa18.28■□□□□ 0.52
SCNN1A-202ENST00000338748 TMEM139Q8IV31 216 aa18.28■□□□□ 0.52
SCNN1A-202ENST00000338748 ADSSL1Q8N142 457 aa18.28■□□□□ 0.52
SCNN1A-202ENST00000338748 ZBTB21Q9ULJ3 1066 aa18.28■□□□□ 0.52
SCNN1A-202ENST00000338748 OPLAHO14841 1288 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 RHOBTB3O94955 611 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 TNNT1P13805 278 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 KCNB1Q14721 858 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 ECM1Q16610 540 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 SPECC1LQ69YQ0 1117 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 TMX1Q9H3N1 280 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 CUEDC2Q9H467 287 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 BRCA1P38398 1863 aaKnown RBP18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 WNT10BO00744 389 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 NYAP1Q6ZVC0 841 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 KCNK18Q7Z418 384 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 MYRIPQ8NFW9 859 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 HPS3Q969F9 1004 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 ANO3Q9BYT9 981 aa18.27■□□□□ 0.52
SCNN1A-202ENST00000338748 FER1L6Q2WGJ9 1857 aa18.27■□□□□ 0.51
SCNN1A-202ENST00000338748 NFKBIEO00221 500 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 CCT6AP40227 531 aaKnown RBP18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 TC2NQ8N9U0 490 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 GIMAP8Q8ND71 665 aaPredicted RBP18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 TSC1Q92574 1164 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 ZBED3Q96IU2 234 aaPredicted RBP18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 PRIMPOLQ96LW4 560 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 PGAP2Q9UHJ9 254 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 MYL1P05976 194 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 FCER1AP12319 257 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 ADKP55263 362 aaKnown RBP18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 MCM6Q14566 821 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 KRT31Q15323 416 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 TMEM266Q2M3C6 531 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 BTNL9Q6UXG8 535 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 SNX29Q8TEQ0 813 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 CALML4Q96GE6 196 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
SCNN1A-202ENST00000338748 PBX1P40424 430 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 ASIC1P78348 528 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 STK4Q13043 487 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 ZYXQ15942 572 aaKnown RBP18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 CEP135Q66GS9 1140 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 IRF2BP1Q8IU81 584 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 MTMR14Q8NCE2 650 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 C7orf25Q9BPX7 421 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 KCND1Q9NSA2 647 aa18.25■□□□□ 0.51
SCNN1A-202ENST00000338748 TGFB2P61812 414 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms