RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
CSMD2-202ENST00000338325 DUSP28Q4G0W2 176 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 PURBQ96QR8 312 aaKnown RBP13.6□□□□□ -0.23
CSMD2-202ENST00000338325 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 ADD3Q9UEY8 706 aaKnown RBP13.6□□□□□ -0.23
CSMD2-202ENST00000338325 TRANK1O15050 2925 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 TNKSO95271 1327 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 LOC102724159A0A0B4J2E5 919 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 NMT2O60551 498 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 SUPT20HL2P0C7V6 817 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 CPT1AP50416 773 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 ALDH5A1P51649 535 aaPredicted RBP13.59□□□□□ -0.23
CSMD2-202ENST00000338325 CTDSPL2Q05D32 466 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 PWP2Q15269 919 aaKnown RBP13.59□□□□□ -0.23
CSMD2-202ENST00000338325 CCDC96Q2M329 555 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 MICALL1Q8N3F8 863 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 PI4K2BQ8TCG2 481 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
CSMD2-202ENST00000338325 TRMT13Q9NUP7 481 aaKnown RBP13.59□□□□□ -0.23
CSMD2-202ENST00000338325 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 NCOR1O75376 2440 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 MYL3P08590 195 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 CYP2C9P11712 490 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 PURAQ00577 322 aaKnown RBP13.59□□□□□ -0.23
CSMD2-202ENST00000338325 BAATQ14032 418 aaPredicted RBP13.59□□□□□ -0.23
CSMD2-202ENST00000338325 TTLL4Q14679 1199 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 WDR11Q9BZH6 1224 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
CSMD2-202ENST00000338325 PTPRSQ13332 1948 aa13.58□□□□□ -0.23
CSMD2-202ENST00000338325 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.24
CSMD2-202ENST00000338325 FOXP2O15409 715 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 RANBP6O60518 1105 aaKnown RBP13.58□□□□□ -0.24
CSMD2-202ENST00000338325 ACTN1P12814 892 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 NOVP48745 357 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 DEFB128Q7Z7B8 93 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 OR6J1Q8NGC5 347 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 MTG1Q9BT17 334 aaPredicted RBP13.58□□□□□ -0.24
CSMD2-202ENST00000338325 INCENPQ9NQS7 918 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 BDP1A6H8Y1 2624 aa13.58□□□□□ -0.24
CSMD2-202ENST00000338325 RBM47A0AV96 593 aaKnown RBP13.57□□□□□ -0.24
CSMD2-202ENST00000338325 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 NFIBO00712 420 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 CA3P07451 260 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 RFC2P35250 354 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 SLC16A2P36021 539 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 AAK1Q2M2I8 961 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 BTNL9Q6UXG8 535 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 SLC9A7Q96T83 725 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
CSMD2-202ENST00000338325 ANAPC4Q9UJX5 808 aa13.57□□□□□ -0.24
CSMD2-202ENST00000338325 RAD50Q92878 1312 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 XIRP2A4UGR9 3374 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 ORC4O43929 436 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 BMP1P13497 986 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 POU3F3P20264 500 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 TFF2Q03403 129 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 SKIV2LQ15477 1246 aaKnown RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 BRDTQ58F21 947 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 FAM47CQ5HY64 1035 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 SLC30A10Q6XR72 485 aa13.56□□□□□ -0.24
CSMD2-202ENST00000338325 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 PRRC2BQ5JSZ5 2229 aaKnown RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 TRIP12Q14669 1992 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-202ENST00000338325 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 NKRFO15226 690 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSMD2-202ENST00000338325 CALML3P27482 149 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 PDE4DQ08499 809 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
CSMD2-202ENST00000338325 NFRKBQ6P4R8 1299 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 PHOSPHO2Q8TCD6 241 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
CSMD2-202ENST00000338325 MTCH2Q9Y6C9 303 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 TET1Q8NFU7 2136 aa13.55□□□□□ -0.24
CSMD2-202ENST00000338325 FRMPD2Q68DX3 1309 aaPredicted RBP13.55□□□□□ -0.24
CSMD2-202ENST00000338325 KIAA1217Q5T5P2 1943 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 RFXAPO00287 272 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 KPNA6O60684 536 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 FGRP09769 529 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
CSMD2-202ENST00000338325 MX1P20591 662 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 KCNQ1P51787 676 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
CSMD2-202ENST00000338325 VPS53Q5VIR6 699 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 RNF207Q6ZRF8 634 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 RETREG2Q8NC44 543 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 CLEC4DQ8WXI8 215 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
CSMD2-202ENST00000338325 TOMM22Q9NS69 142 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms