RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RAET1EQ8TD07 263 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 PXYLP1Q8TE99 480 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 APBA2Q99767 749 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 PSTPIP2Q9H939 334 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
SEC13-201ENST00000337354 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
SEC13-201ENST00000337354 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 STXBP3O00186 592 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 PIK3CDO00329 1044 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 OPLAHO14841 1288 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 COBLO75128 1261 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 POLR2MP0CAP2 368 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 TAL1P17542 331 aaPredicted RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 CYP2B6P20813 491 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 HSD17B4P51659 736 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 MSL3Q8N5Y2 521 aaKnown RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 FAM133AQ8N9E0 248 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 CCDC148Q8NFR7 591 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 GPKOWQ92917 476 aaPredicted RBP eCLIP17.69■□□□□ 0.424e-7■□□□□ 8.6
SEC13-201ENST00000337354 CUL5Q93034 780 aa17.69■□□□□ 0.42
SEC13-201ENST00000337354 ADD3Q9UEY8 706 aaKnown RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 COL11A1P12107 1806 aaPredicted RBP17.69■□□□□ 0.42
SEC13-201ENST00000337354 LOC102724159A0A0B4J2E5 919 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 ESYT2A0FGR8 921 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 CFBP00751 764 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 PGK2P07205 417 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
SEC13-201ENST00000337354 GNA11P29992 359 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 CUL4AQ13619 759 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
SEC13-201ENST00000337354 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 DNERQ8NFT8 737 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 ZMYND12Q9H0C1 365 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 C6orf50Q9HD87 102 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 PTCH2Q9Y6C5 1203 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 DOCK3Q8IZD9 2030 aa17.68■□□□□ 0.42
SEC13-201ENST00000337354 CALML3P27482 149 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 OLFML2BQ68BL8 750 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 SYTL5Q8TDW5 730 aaPredicted RBP17.67■□□□□ 0.42
SEC13-201ENST00000337354 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 RIC8AQ9NPQ8 531 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 KIF3AQ9Y496 699 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 PLXNB2O15031 1838 aa17.67■□□□□ 0.42
SEC13-201ENST00000337354 B4DLN1 442 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 ADCY3O60266 1144 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 JAK2O60674 1132 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 TYW1BQ6NUM6 668 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 NPLOC4Q8TAT6 608 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 BICD2Q8TD16 824 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 INTS4Q96HW7 963 aaKnown RBP17.66■□□□□ 0.42
SEC13-201ENST00000337354 MAML3Q96JK9 1138 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 MPHOSPH6Q99547 160 aaKnown RBP17.66■□□□□ 0.42
SEC13-201ENST00000337354 ALG1Q9BT22 464 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 ASB14A6NK59 587 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 MEIS2O14770 477 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 GRK4P32298 578 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 ADCY7P51828 1080 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 NLRP5P59047 1200 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 SLC9C1Q4G0N8 1177 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 MAMDC4Q6UXC1 1216 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 SLC30A10Q6XR72 485 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 NSUN6Q8TEA1 469 aaKnown RBP17.66■□□□□ 0.42
SEC13-201ENST00000337354 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
SEC13-201ENST00000337354 SOWAHBA6NEL2 793 aa17.65■□□□□ 0.42
SEC13-201ENST00000337354 FOSP01100 380 aaPredicted RBP17.65■□□□□ 0.42
SEC13-201ENST00000337354 IGHA2P01877 340 aa17.65■□□□□ 0.42
SEC13-201ENST00000337354 MFSD14CQ5VZR4 134 aa17.65■□□□□ 0.42
SEC13-201ENST00000337354 IWS1Q96ST2 819 aa17.65■□□□□ 0.42
SEC13-201ENST00000337354 TINF2Q9BSI4 451 aa17.65■□□□□ 0.42
SEC13-201ENST00000337354 RBBP6Q7Z6E9 1792 aaKnown RBP17.64■□□□□ 0.42
SEC13-201ENST00000337354 HOXA13P31271 388 aaPredicted RBP17.64■□□□□ 0.41
SEC13-201ENST00000337354 SOX10P56693 466 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 TRIM29Q14134 588 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 AIFM3Q96NN9 605 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 RMDN3Q96TC7 470 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
SEC13-201ENST00000337354 SYNGAP1Q96PV0 1343 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 SPDYE3A6NKU9 549 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 HMGCRP04035 888 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
SEC13-201ENST00000337354 ALDH5A1P51649 535 aaPredicted RBP17.63■□□□□ 0.41
SEC13-201ENST00000337354 AP3B2Q13367 1082 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 CCL14Q16627 93 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 FCHSD1Q86WN1 690 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 DAGLBQ8NCG7 672 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 MORC4Q8TE76 937 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 TRIB2Q92519 343 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms