RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 PDE4AP27815 886 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 RPS6P62753 249 aaKnown RBP20.73■□□□□ 0.91
CMTM1-204ENST00000336328 BEX3Q00994 111 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 PDE4DQ08499 809 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 IFIT1BQ5T764 474 aaKnown RBP20.73■□□□□ 0.91
CMTM1-204ENST00000336328 FBXO16Q8IX29 292 aaPredicted RBP20.73■□□□□ 0.91
CMTM1-204ENST00000336328 WDR11Q9BZH6 1224 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 PDGFCQ9NRA1 345 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 LTBP2Q14767 1821 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 ASTN1O14525 1302 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 TNKSO95271 1327 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 ABCB11O95342 1321 aa20.73■□□□□ 0.91
CMTM1-204ENST00000336328 NKRFO15226 690 aaKnown RBP eCLIP20.72■□□□□ 0.91
CMTM1-204ENST00000336328 DHX16O60231 1041 aaKnown RBP20.72■□□□□ 0.91
CMTM1-204ENST00000336328 CXCL17Q6UXB2 119 aa20.72■□□□□ 0.91
CMTM1-204ENST00000336328 POLR3EQ9NVU0 708 aa20.72■□□□□ 0.91
CMTM1-204ENST00000336328 STXBP5LQ9Y2K9 1186 aa20.72■□□□□ 0.91
CMTM1-204ENST00000336328 MRPL11Q9Y3B7 192 aaKnown RBP20.72■□□□□ 0.91
CMTM1-204ENST00000336328 LAMA4Q16363 1823 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 LAMA3Q16787 3333 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 RBM47A0AV96 593 aaKnown RBP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 ERICH2A1L162 156 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 ITGB8P26012 769 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 CHMLP26374 656 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 IRX5P78411 483 aaPredicted RBP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 SMAD3P84022 425 aaKnown RBP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 TRAF1Q13077 416 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 PPIGQ13427 754 aaKnown RBP eCLIP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 CDC37Q16543 378 aaPredicted RBP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 USH1GQ495M9 461 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 C9orf50Q5SZB4 431 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 MFSD5Q6N075 450 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 ADGRF4Q8IZF3 695 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 TMEM199Q8N511 208 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 PURBQ96QR8 312 aaKnown RBP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 GPHNQ9NQX3 736 aaPredicted RBP20.71■□□□□ 0.91
CMTM1-204ENST00000336328 TBX21Q9UL17 535 aa20.71■□□□□ 0.91
CMTM1-204ENST00000336328 GSPT1P15170 499 aaKnown RBP20.7■□□□□ 0.9
CMTM1-204ENST00000336328 CPT1AP50416 773 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 ITGA7Q13683 1181 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 ZNF697Q5TEC3 545 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 Q7L0L9 218 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 FAM126BQ8IXS8 530 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 SLC43A3Q8NBI5 491 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 SCFD2Q8WU76 684 aa20.7■□□□□ 0.9
CMTM1-204ENST00000336328 KPNA6O60684 536 aa20.69■□□□□ 0.9
CMTM1-204ENST00000336328 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
CMTM1-204ENST00000336328 SLC30A10Q6XR72 485 aa20.69■□□□□ 0.9
CMTM1-204ENST00000336328 SLC17A8Q8NDX2 589 aa20.69■□□□□ 0.9
CMTM1-204ENST00000336328 NSUN6Q8TEA1 469 aaKnown RBP20.69■□□□□ 0.9
CMTM1-204ENST00000336328 RNPC3Q96LT9 517 aaKnown RBP20.69■□□□□ 0.9
CMTM1-204ENST00000336328 VAT1LQ9HCJ6 419 aa20.69■□□□□ 0.9
CMTM1-204ENST00000336328 EDNRBP24530 442 aa20.68■□□□□ 0.9
CMTM1-204ENST00000336328 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
CMTM1-204ENST00000336328 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
CMTM1-204ENST00000336328 RALYLQ86SE5 291 aaKnown RBP20.68■□□□□ 0.9
CMTM1-204ENST00000336328 SAMD3Q8N6K7 520 aa20.68■□□□□ 0.9
CMTM1-204ENST00000336328 IWS1Q96ST2 819 aa20.68■□□□□ 0.9
CMTM1-204ENST00000336328 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.67■□□□□ 0.9
CMTM1-204ENST00000336328 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.67■□□□□ 0.9
CMTM1-204ENST00000336328 CD4P01730 458 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 SUPT20HL2P0C7V6 817 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 TTLL4Q14679 1199 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 NCOA7Q8NI08 942 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 AMNQ9BXJ7 453 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 CPVLQ9H3G5 476 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 JMJD4Q9H9V9 463 aa20.67■□□□□ 0.9
CMTM1-204ENST00000336328 MAP3K20Q9NYL2 800 aaKnown RBP20.67■□□□□ 0.9
CMTM1-204ENST00000336328 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
CMTM1-204ENST00000336328 KLRF2D3W0D1 207 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 IFIT3O14879 490 aaKnown RBP20.66■□□□□ 0.9
CMTM1-204ENST00000336328 CYP21A2P08686 494 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 SEC23AQ15436 765 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 QRICH1Q2TAL8 776 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 OR6J1Q8NGC5 347 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 IL25Q9H293 177 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 MYH6P13533 1939 aa20.66■□□□□ 0.9
CMTM1-204ENST00000336328 LCTP09848 1927 aa20.65■□□□□ 0.9
CMTM1-204ENST00000336328 SGSM2O43147 1006 aa20.65■□□□□ 0.9
CMTM1-204ENST00000336328 TXNP10599 105 aaKnown RBP20.65■□□□□ 0.9
CMTM1-204ENST00000336328 STXBP2Q15833 593 aa20.65■□□□□ 0.9
CMTM1-204ENST00000336328 SYTL5Q8TDW5 730 aaPredicted RBP20.65■□□□□ 0.9
CMTM1-204ENST00000336328 RMDN3Q96TC7 470 aa20.65■□□□□ 0.9
CMTM1-204ENST00000336328 TMEM265A0A087WTH1 108 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 MYL3P08590 195 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 EPHB4P54760 987 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 PTH1RQ03431 593 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 WTAPQ15007 396 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 PSRC1Q6PGN9 363 aaPredicted RBP20.64■□□□□ 0.89
CMTM1-204ENST00000336328 CYB5R4Q7L1T6 521 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 RPUSD2Q8IZ73 545 aaKnown RBP20.64■□□□□ 0.89
CMTM1-204ENST00000336328 MAP4K1Q92918 833 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 TAAR1Q96RJ0 339 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 MTG1Q9BT17 334 aaPredicted RBP20.64■□□□□ 0.89
CMTM1-204ENST00000336328 MTIF3Q9H2K0 278 aaKnown RBP20.64■□□□□ 0.89
CMTM1-204ENST00000336328 SEMA6BQ9H3T3 888 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 HIPK3Q9H422 1215 aa20.64■□□□□ 0.89
CMTM1-204ENST00000336328 PALM3A6NDB9 673 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms