RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MMTAG2Q9BU76 263 aaKnown RBP14.17□□□□□ -0.14
LIMK1-201ENST00000336180 GJA3Q9Y6H8 435 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 LRRC37AA6NMS7 1700 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 CCDC93Q567U6 631 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 COL4A5P29400 1685 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 NRXN2Q9P2S2 1712 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 ZBTB5O15062 677 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 VSTM4Q8IW00 320 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 OGFOD1Q8N543 542 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 SPATA20Q8TB22 786 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 ENOX1Q8TC92 643 aaKnown RBP14.17□□□□□ -0.14
LIMK1-201ENST00000336180 ZHX3Q9H4I2 956 aa14.17□□□□□ -0.14
LIMK1-201ENST00000336180 ZNF70Q9UC06 446 aaPredicted RBP14.17□□□□□ -0.14
LIMK1-201ENST00000336180 NPHP3-ACAD11A0A0J9YXS1 232 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 MEIS1O00470 390 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 GTPBP6O43824 516 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-201ENST00000336180 SNHG28P0DPA3 235 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 FAM83BQ5T0W9 1011 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 RSBN1LQ6PCB5 846 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-201ENST00000336180 ZNF18P17022 549 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 STK4Q13043 487 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 CC2D2BQ6DHV5 1058 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 DLK2Q6UY11 383 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 DAGLBQ8NCG7 672 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 SNX29Q8TEQ0 813 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 KANSL2Q9H9L4 492 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 PKD2L1Q9P0L9 805 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 DDX25Q9UHL0 483 aaKnown RBP14.16□□□□□ -0.14
LIMK1-201ENST00000336180 SERPINA10Q9UK55 444 aa14.16□□□□□ -0.14
LIMK1-201ENST00000336180 SMCHD1A6NHR9 2005 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 RASSF7Q02833 373 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 CXCL9Q07325 125 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 PDE4DQ08499 809 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 R3HDM1Q15032 1099 aaKnown RBP14.15□□□□□ -0.14
LIMK1-201ENST00000336180 SAMD7Q7Z3H4 446 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 CCAR2Q8N163 923 aaKnown RBP14.15□□□□□ -0.14
LIMK1-201ENST00000336180 CCDC34Q96HJ3 373 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 TMOD2Q9NZR1 351 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 RNF225M0QZC1 329 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-201ENST00000336180 PTPN14Q15678 1187 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 PRR16Q569H4 304 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 ARL6IP4Q66PJ3 421 aaKnown RBP14.15□□□□□ -0.14
LIMK1-201ENST00000336180 SYT10Q6XYQ8 523 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 CUL5Q93034 780 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 ZBTB9Q96C00 473 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 GSDMAQ96QA5 445 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 DACH1Q9UI36 760 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 N4BP3O15049 544 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 ZBTB22O15209 634 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 PRKG1Q13976 671 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 SPATA1Q5VX52 437 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
LIMK1-201ENST00000336180 CFBP00751 764 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 RBL2Q08999 1139 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 PAK1Q13153 545 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 GRB10Q13322 594 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 KRT31Q15323 416 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 TOGARAM2Q6ZUX3 1019 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
LIMK1-201ENST00000336180 NOVP48745 357 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 IRX3P78415 501 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-201ENST00000336180 CYP4A11Q02928 519 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 TBC1D10BQ4KMP7 808 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-201ENST00000336180 NIM1KQ8IY84 436 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 TRIM47Q96LD4 638 aa14.14□□□□□ -0.15
LIMK1-201ENST00000336180 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-201ENST00000336180 DHX36Q9H2U1 1008 aaKnown RBP14.14□□□□□ -0.15
LIMK1-201ENST00000336180 FAM170AA1A519 330 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 SOWAHDA6NJG2 315 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 E9PMD0 336 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 CBFA2T2O43439 604 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 KLRC4O43908 158 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 KLK7P49862 253 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 SMAP1Q8IYB5 467 aaPredicted RBP14.13□□□□□ -0.15
LIMK1-201ENST00000336180 IGSF22Q8N9C0 903 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 PPP1R13BQ96KQ4 1090 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 PNMA5Q96PV4 448 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 HOMER2Q9NSB8 354 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 MYMKA6NI61 221 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 CHMP2AO43633 222 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 GSDMDP57764 484 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 TMEM179Q6ZVK1 233 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 LRRN4CLQ8ND94 238 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 HAS1Q92839 578 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 CCDC17Q96LX7 622 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 RIC8AQ9NPQ8 531 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 BMP3P12645 472 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 GPATCH4Q5T3I0 446 aaKnown RBP14.13□□□□□ -0.15
LIMK1-201ENST00000336180 APTXQ7Z2E3 356 aaKnown RBP14.13□□□□□ -0.15
LIMK1-201ENST00000336180 TFR2Q9UP52 801 aa14.13□□□□□ -0.15
LIMK1-201ENST00000336180 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 POTECB2RU33 542 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 CASP14P31944 242 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms