RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 WBP1LQ9NX94 342 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 HOXA13P31271 388 aaPredicted RBP24.63■■□□□ 1.53
TPM1-204ENST00000334895 TAF1CQ15572 869 aaPredicted RBP24.63■■□□□ 1.53
TPM1-204ENST00000334895 MYSM1Q5VVJ2 828 aa24.63■■□□□ 1.53
TPM1-204ENST00000334895 PIK3AP1Q6ZUJ8 805 aa24.63■■□□□ 1.53
TPM1-204ENST00000334895 REM2Q8IYK8 340 aaPredicted RBP24.63■■□□□ 1.53
TPM1-204ENST00000334895 ANKRD13CQ8N6S4 541 aa24.63■■□□□ 1.53
TPM1-204ENST00000334895 PGBD1Q96JS3 809 aa24.63■■□□□ 1.53
TPM1-204ENST00000334895 MORF4L1Q9UBU8 362 aa24.63■■□□□ 1.53
TPM1-204ENST00000334895 CFBP00751 764 aa24.62■■□□□ 1.53
TPM1-204ENST00000334895 HSD17B4P51659 736 aa24.62■■□□□ 1.53
TPM1-204ENST00000334895 ACAD9Q9H845 621 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 TCHHQ07283 1943 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 GCOM1H8Y6P7 765 aaPredicted RBP24.61■■□□□ 1.53
TPM1-204ENST00000334895 POLR2MP0CAP2 368 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 HSPA1AP0DMV8 641 aaKnown RBP24.61■■□□□ 1.53
TPM1-204ENST00000334895 HSPA1BP0DMV9 641 aaKnown RBP24.61■■□□□ 1.53
TPM1-204ENST00000334895 TOB1P50616 345 aaPredicted RBP24.61■■□□□ 1.53
TPM1-204ENST00000334895 DNM1Q05193 864 aaKnown RBP24.61■■□□□ 1.53
TPM1-204ENST00000334895 MCF2L2Q86YR7 1114 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 TEX2Q8IWB9 1127 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 CHST13Q8NET6 341 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 GPRC5AQ8NFJ5 357 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 BEGAINQ9BUH8 593 aa24.61■■□□□ 1.53
TPM1-204ENST00000334895 ERCC3P19447 782 aa24.6■■□□□ 1.53
TPM1-204ENST00000334895 SLC30A10Q6XR72 485 aa24.6■■□□□ 1.53
TPM1-204ENST00000334895 KRT25Q7Z3Z0 450 aa24.6■■□□□ 1.53
TPM1-204ENST00000334895 RNF186Q9NXI6 227 aa24.6■■□□□ 1.53
TPM1-204ENST00000334895 COL20A1Q9P218 1284 aa24.6■■□□□ 1.53
TPM1-204ENST00000334895 ATP6V1DQ9Y5K8 247 aa24.6■■□□□ 1.53
TPM1-204ENST00000334895 CCDC194A0A1B0GVG4 234 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 WNT7AO00755 349 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 BCRP11274 1271 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 CRHR2Q13324 411 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 CLEC17AQ6ZS10 378 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 NCAPG2Q86XI2 1143 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 FTOQ9C0B1 505 aaKnown RBP eCLIP24.59■■□□□ 1.53
TPM1-204ENST00000334895 PORCNQ9H237 461 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 CPA4Q9UI42 421 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 LCTP09848 1927 aa24.59■■□□□ 1.53
TPM1-204ENST00000334895 EDIL3O43854 480 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 TRPA1O75762 1119 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 BAG4O95429 457 aaKnown RBP24.58■■□□□ 1.53
TPM1-204ENST00000334895 SLC25A27O95847 323 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 RPS6P62753 249 aaKnown RBP24.58■■□□□ 1.53
TPM1-204ENST00000334895 AP3B2Q13367 1082 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 FAM110CQ1W6H9 321 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 INF2Q27J81 1249 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 NSMFQ6X4W1 530 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 ANO3Q9BYT9 981 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 A1CFQ9NQ94 594 aaKnown RBP24.58■■□□□ 1.53
TPM1-204ENST00000334895 TSKSQ9UJT2 592 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 MYH7BA7E2Y1 1941 aa24.58■■□□□ 1.53
TPM1-204ENST00000334895 TLR2O60603 784 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 NBR1Q14596 966 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 NONOQ15233 471 aaKnown RBP eCLIP24.57■■□□□ 1.52
TPM1-204ENST00000334895 C17orf99Q6UX52 265 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 RNF207Q6ZRF8 634 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 SHCBP1Q8NEM2 672 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 SYTL5Q8TDW5 730 aaPredicted RBP24.57■■□□□ 1.52
TPM1-204ENST00000334895 USP28Q96RU2 1077 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 CASP8AP2Q9UKL3 1982 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 BAATQ14032 418 aaPredicted RBP24.57■■□□□ 1.52
TPM1-204ENST00000334895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.57■■□□□ 1.52
TPM1-204ENST00000334895 FCHSD1Q86WN1 690 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 SAMD3Q8N6K7 520 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 TBCKQ8TEA7 893 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 EFCC1Q9HA90 598 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 ZFYVE28Q9HCC9 887 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 CYP39A1Q9NYL5 469 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 TFIP11Q9UBB9 837 aaKnown RBP24.57■■□□□ 1.52
TPM1-204ENST00000334895 FBXO40Q9UH90 709 aa24.57■■□□□ 1.52
TPM1-204ENST00000334895 CA12O43570 354 aa24.56■■□□□ 1.52
TPM1-204ENST00000334895 COPB2P35606 906 aa24.56■■□□□ 1.52
TPM1-204ENST00000334895 RILPL1Q5EBL4 403 aa24.56■■□□□ 1.52
TPM1-204ENST00000334895 CRYGNQ8WXF5 182 aa24.56■■□□□ 1.52
TPM1-204ENST00000334895 PURBQ96QR8 312 aaKnown RBP24.56■■□□□ 1.52
TPM1-204ENST00000334895 MAP3K20Q9NYL2 800 aaKnown RBP24.56■■□□□ 1.52
TPM1-204ENST00000334895 CNPY2Q9Y2B0 182 aa24.56■■□□□ 1.52
TPM1-204ENST00000334895 SPDYE3A6NKU9 549 aa24.55■■□□□ 1.52
TPM1-204ENST00000334895 FOXN1O15353 648 aa24.55■■□□□ 1.52
TPM1-204ENST00000334895 FOSP01100 380 aaPredicted RBP24.55■■□□□ 1.52
TPM1-204ENST00000334895 MROH8Q9H579 483 aa24.55■■□□□ 1.52
TPM1-204ENST00000334895 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 ATP2B1P20020 1258 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 CCNA1P78396 465 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 MCTP2Q6DN12 878 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 MAF1Q9H063 256 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 PCDHB6Q9Y5E3 794 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 CLIC4Q9Y696 253 aa24.54■■□□□ 1.52
TPM1-204ENST00000334895 TBC1D8O95759 1140 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 TRAPPC10P48553 1259 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 ZNF396Q96N95 335 aaPredicted RBP24.53■■□□□ 1.52
TPM1-204ENST00000334895 SAGE1Q9NXZ1 904 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 NOL7Q9UMY1 257 aaKnown RBP24.53■■□□□ 1.52
TPM1-204ENST00000334895 RPTORQ8N122 1335 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 PLXNB2O15031 1838 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 SREBF1P36956 1147 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 KRT85P78386 507 aa24.53■■□□□ 1.52
TPM1-204ENST00000334895 CEBPZQ03701 1054 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms