RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CEP170P1Q96L14 293 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 TNNC2P02585 160 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 YWHAEP62258 255 aaKnown RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 SPECC1LQ69YQ0 1117 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 POMGNT1Q8WZA1 660 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 USTQ9Y2C2 406 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 TMEM191BP0C7N4 346 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 STAT1P42224 750 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 RNASE9P60153 205 aaKnown RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 PPP2R5AQ15172 486 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 Q3C1V9 767 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 INO80BQ9C086 356 aaPredicted RBP16.57■□□□□ 0.24
C9orf47-201ENST00000334490 AKT3Q9Y243 479 aa16.57■□□□□ 0.24
C9orf47-201ENST00000334490 MYCP01106 439 aaPredicted RBP16.56■□□□□ 0.24
C9orf47-201ENST00000334490 RHOXF2BP0C7M4 288 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 CBX1P83916 185 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 TFDP1Q14186 410 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 RHOXF2Q9BQY4 288 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
C9orf47-201ENST00000334490 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 NEDD4P46934 1319 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 DCAF4Q8WV16 495 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 VAV2P52735 878 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 TMTC3Q6ZXV5 915 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
C9orf47-201ENST00000334490 METTL14Q9HCE5 456 aaKnown RBP16.56■□□□□ 0.24
C9orf47-201ENST00000334490 FRMPD1Q5SYB0 1578 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 USP17L10C9JJH3 530 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 NMT2O60551 498 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 ARL1P40616 181 aaPredicted RBP16.56■□□□□ 0.24
C9orf47-201ENST00000334490 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 HOXC10Q9NYD6 342 aa16.56■□□□□ 0.24
C9orf47-201ENST00000334490 MTRF1LQ9UGC7 380 aaKnown RBP16.56■□□□□ 0.24
C9orf47-201ENST00000334490 FAM170AA1A519 330 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 MEIS1O00470 390 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 ARHGAP6O43182 974 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 FAM193BQ96PV7 902 aaPredicted RBP16.55■□□□□ 0.24
C9orf47-201ENST00000334490 NAP1L3Q99457 506 aaPredicted RBP16.55■□□□□ 0.24
C9orf47-201ENST00000334490 TXNDC16Q9P2K2 825 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 NKX1-1Q15270 411 aaPredicted RBP16.55■□□□□ 0.24
C9orf47-201ENST00000334490 C1orf112Q9NSG2 853 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 GBP6Q6ZN66 633 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 RSPH3Q86UC2 560 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 SECISBP2LQ93073 1101 aaKnown RBP16.55■□□□□ 0.24
C9orf47-201ENST00000334490 APOL6Q9BWW8 343 aa16.55■□□□□ 0.24
C9orf47-201ENST00000334490 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
C9orf47-201ENST00000334490 UBL4BQ8N7F7 174 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 FAM107BQ9H098 131 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 MYO1AQ9UBC5 1043 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 NTSR2O95665 410 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 LINC00301Q8NCQ3 95 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 GSDMAQ96QA5 445 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 FANCLQ9NW38 375 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 ENAHQ8N8S7 591 aaPredicted RBP16.54■□□□□ 0.24
C9orf47-201ENST00000334490 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
C9orf47-201ENST00000334490 SLC15A2Q16348 729 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 CYB5R4Q7L1T6 521 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
C9orf47-201ENST00000334490 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
C9orf47-201ENST00000334490 NAPGQ99747 312 aaPredicted RBP16.54■□□□□ 0.24
C9orf47-201ENST00000334490 ZC3H13Q5T200 1668 aaKnown RBP16.54■□□□□ 0.24
C9orf47-201ENST00000334490 ZBTB5O15062 677 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 ALX1Q15699 326 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 PDXDC2PQ6P474 469 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 PAIP2Q9BPZ3 127 aaKnown RBP16.53■□□□□ 0.24
C9orf47-201ENST00000334490 SUGT1Q9Y2Z0 365 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 PCDHB6Q9Y5E3 794 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 F5H6K3 240 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
C9orf47-201ENST00000334490 CSF1RP07333 972 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 MRPS9P82933 396 aaKnown RBP16.53■□□□□ 0.24
C9orf47-201ENST00000334490 KLRC3Q07444 240 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 STRIP1Q5VSL9 837 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 OR8K1Q8NGG5 319 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 FAM169AQ9Y6X4 670 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 IQSEC2Q5JU85 1478 aa16.53■□□□□ 0.24
C9orf47-201ENST00000334490 TLDC2A0PJX2 215 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms