RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SYTL5Q8TDW5 730 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 SCAND2PQ9GZW5 306 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 EHBP1L1Q8N3D4 1523 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 GRPEL2Q8TAA5 225 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC26Q8TAB7 109 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRIM36Q9NQ86 728 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 MRGBPQ9NV56 204 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC59Q9P031 241 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 LRPPRCP42704 1394 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 ACTN4O43707 911 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 SUN1O94901 812 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 WEE1P30291 646 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 GJA9P57773 515 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 TEDDM1Q5T9Z0 273 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 EIF3CQ99613 913 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 CINPQ9BW66 212 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 OLA1Q9NTK5 396 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 EHD2Q9NZN4 543 aa6.59□□□□□ -1.35
CDC42BPA-201ENST00000334218 SMNDC1O75940 238 aaKnown RBP eCLIP6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 MORC1Q86VD1 984 aa6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZSCAN29Q8IWY8 852 aaPredicted RBP6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 TOR1AIP2Q8NFQ8 470 aa6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM192AQ9GZU8 254 aa6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 CAB39LQ9H9S4 337 aa6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 MAGED1Q9Y5V3 778 aaPredicted RBP6.59□□□□□ -1.36
CDC42BPA-201ENST00000334218 METTL21EPA6NDL7 271 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 GOLGA8JA6NMD2 632 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 GOLGA8TH3BQL2 631 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 BAIAP3O94812 1187 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PAMP19021 973 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SLC12A2P55011 1212 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 OTUD4Q01804 1114 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 CHD1LQ86WJ1 897 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SIX5Q8N196 739 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 HSPH1Q92598 858 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAF2Q96CS3 445 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 KLHL25Q9H0H3 589 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PCP4L1A6NKN8 68 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 IGSF3O75054 1194 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 CHRNA3P32297 505 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 UNC45BQ8IWX7 931 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 MINDY2Q8NBR6 621 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SNIP1Q8TAD8 396 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ACMSDQ8TDX5 336 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 RRBP1Q9P2E9 1410 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 DDX58O95786 925 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 GNAT2P19087 354 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 MLH1P40692 756 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 AP1B1Q10567 949 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 RSRC2Q7L4I2 434 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 HIC2Q96JB3 615 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 DACH2Q96NX9 599 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 CRNKL1Q9BZJ0 848 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 G3V3G9 751 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 DCAF8Q5TAQ9 597 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SPIRE2Q8WWL2 714 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 KIFC2Q96AC6 838 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ANKRD36BP1Q96IX9 119 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 AP1M1Q9BXS5 423 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 CNOT10Q9H9A5 744 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PRDM16Q9HAZ2 1276 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 CCDC93Q567U6 631 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 DDHD1Q8NEL9 900 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM200AQ8TCP9 573 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 RUNDC3BQ96NL0 473 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 FHDC1Q9C0D6 1143 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PDP2Q9P2J9 529 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 APOBEC2Q9Y235 224 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 WDR7Q9Y4E6 1490 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PABPC1LQ4VXU2 614 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SNAP47Q5SQN1 464 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 KANK3Q6NY19 840 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM15Q9C019 465 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ANKRD6Q9Y2G4 727 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 KLHL20Q9Y2M5 609 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 FANCAO15360 1455 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SNPHO15079 494 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 CAND2O75155 1236 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM3O75382 744 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 AKAP5P24588 427 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 S100A5P33763 92 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PARP10Q53GL7 1025 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PIK3AP1Q6ZUJ8 805 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 RD3Q7Z3Z2 195 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 SERPINI1Q99574 410 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 MNTQ99583 582 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 EPS8L2Q9H6S3 715 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 BIVM-ERCC5R4GMW8 1640 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 POTEFA5A3E0 1075 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 KRT86O43790 486 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 KRT1P04264 644 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 UBTFL1P0CB47 393 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ELF1P32519 619 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 DENND6BQ8NEG7 585 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZBTB9Q96C00 473 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 TEX12Q9BXU0 123 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 C17orf75Q9HAS0 396 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms