RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 GRM4Q14833 912 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 LPAR1Q92633 364 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 RABEP2Q9H5N1 569 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 RPAP3Q9H6T3 665 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 SHANK3Q9BYB0 1731 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 RCAN1P53805 252 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 PTPN21Q16825 1174 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 TTC38Q5R3I4 469 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 DPP9Q86TI2 863 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 CDCA5Q96FF9 252 aa13.18□□□□□ -0.3
HDAC6-201ENST00000334136 LUC7LQ9NQ29 371 aaKnown RBP13.18□□□□□ -0.3
HDAC6-201ENST00000334136 ZNF202O95125 648 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 ANTXR2P58335 489 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 ERO1BQ86YB8 467 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC6-201ENST00000334136 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-201ENST00000334136 KRT79Q5XKE5 535 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 MICALL1Q8N3F8 863 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 HLTFQ14527 1009 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC6-201ENST00000334136 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
HDAC6-201ENST00000334136 MTIF2P46199 727 aaKnown RBP13.17□□□□□ -0.3
HDAC6-201ENST00000334136 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 CACNA2D4Q7Z3S7 1137 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
HDAC6-201ENST00000334136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■□□ 16.9
HDAC6-201ENST00000334136 BACH1O14867 736 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 ZBTB5O15062 677 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
HDAC6-201ENST00000334136 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
HDAC6-201ENST00000334136 SHMT1P34896 483 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 COG2Q14746 738 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 ATL3Q6DD88 541 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 hCG_1984214I3L0E3 225 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 TUBB4AP04350 444 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 IDEP14735 1019 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 INF2Q27J81 1249 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 ZNF713Q8N859 430 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-201ENST00000334136 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
HDAC6-201ENST00000334136 IVLP07476 585 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 CDC27P30260 824 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 TXKP42681 527 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 UIMC1Q96RL1 719 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 PYM1Q9BRP8 204 aaKnown RBP13.16□□□□□ -0.3
HDAC6-201ENST00000334136 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
HDAC6-201ENST00000334136 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 ATP2C2O75185 946 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 CCT6AP40227 531 aaKnown RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 CCL15Q16663 113 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 TAF4BQ92750 862 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 ALDH8A1Q9H2A2 487 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 FDX1P10109 184 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 MCM3P25205 808 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 FKBP15Q5T1M5 1219 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 PAPPAQ13219 1627 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 ZNF280AP59817 542 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 AMPD3Q01432 767 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 TRMT44Q8IYL2 757 aaKnown RBP13.15□□□□□ -0.3
HDAC6-201ENST00000334136 CEP112Q8N8E3 955 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
HDAC6-201ENST00000334136 USO1O60763 962 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 ECE1P42892 770 aa13.14□□□□□ -0.31
HDAC6-201ENST00000334136 TAF1CQ15572 869 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
HDAC6-201ENST00000334136 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms