RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 THAP9Q9H5L6 903 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.2
VPS33B-201ENST00000333371 EXOC1Q9NV70 894 aa13.77□□□□□ -0.2
VPS33B-201ENST00000333371 MKRN1Q9UHC7 482 aaKnown RBP13.77□□□□□ -0.2
VPS33B-201ENST00000333371 A0A1W2PQC6 194 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 TULP2O00295 520 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 ZNF263O14978 683 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 EPHB6O15197 1021 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
VPS33B-201ENST00000333371 ATP2B2Q01814 1243 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 KCNB1Q14721 858 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 USP17L2Q6R6M4 530 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 DGKHQ86XP1 1220 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 CCDC148Q8NFR7 591 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 PLEKHA4Q9H4M7 779 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 SLC39A2Q9NP94 309 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 LEMD3Q9Y2U8 911 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 DNM2P50570 870 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 USP14P54578 494 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 STIM1Q13586 685 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 MIIPQ5JXC2 388 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 PRR5LQ6MZQ0 368 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 P2RX5Q93086 422 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 TRIM9Q9C026 710 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 CCSER1Q9C0I3 900 aa13.77□□□□□ -0.21
VPS33B-201ENST00000333371 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 TRIM66O15016 1216 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 NAPAP54920 295 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 PSMB7Q99436 277 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 NOC4LQ9BVI4 516 aaKnown RBP13.76□□□□□ -0.21
VPS33B-201ENST00000333371 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 TMEM260Q9NX78 707 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 EIF3JO75822 258 aaKnown RBP13.76□□□□□ -0.21
VPS33B-201ENST00000333371 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 SMARCAL1Q9NZC9 954 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 LRWD1Q9UFC0 647 aa13.76□□□□□ -0.21
VPS33B-201ENST00000333371 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 ACTN2P35609 894 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 EZH2Q15910 746 aaKnown RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 MEA1Q16626 185 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 MUM1L1Q5H9M0 696 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 WDR66Q8TBY9 1149 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 UIMC1Q96RL1 719 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 MMTAG2Q9BU76 263 aaKnown RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 FAM204AQ9H8W3 233 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 JADE2Q9NQC1 790 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 BIN2Q9UBW5 565 aaPredicted RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 SERPINB2P05120 415 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 IDEP14735 1019 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 RASA1P20936 1047 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 CCNE1P24864 410 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 SKIDA1Q1XH10 827 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 PAPD7Q5XG87 772 aaKnown RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 WDR93Q6P2C0 686 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 UBA5Q9GZZ9 404 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 SEMA6BQ9H3T3 888 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 MLXIPQ9HAP2 919 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 FAM207AQ9NSI2 230 aaPredicted RBP13.75□□□□□ -0.21
VPS33B-201ENST00000333371 EHD2Q9NZN4 543 aa13.75□□□□□ -0.21
VPS33B-201ENST00000333371 PALM3A6NDB9 673 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-201ENST00000333371 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 TRIM37O94972 964 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
VPS33B-201ENST00000333371 GYS1P13807 737 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 TXKP42681 527 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 HSP90B2PQ58FF3 399 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 SLC27A3Q5K4L6 730 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 GLIS3Q8NEA6 775 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 PSD3Q9NYI0 1048 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 CAPN6Q9Y6Q1 641 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 ANKRD65E5RJM6 399 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 KRT86O43790 486 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 TMED8Q6PL24 325 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-201ENST00000333371 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 GOLGA5Q8TBA6 731 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
VPS33B-201ENST00000333371 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
VPS33B-201ENST00000333371 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 CDK5RAP2Q96SN8 1893 aa13.74□□□□□ -0.21
VPS33B-201ENST00000333371 RNF40O75150 1001 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 CXCR5P32302 372 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-201ENST00000333371 KRT83P78385 493 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 ZBED6P86452 979 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 ANKRD13CQ8N6S4 541 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 GJA10Q969M2 543 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 PIGSQ96S52 555 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms