RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 TRPV1Q8NER1 839 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 CRISPLD2Q9H0B8 497 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 ABHD16BQ9H3Z7 469 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 PDRG1Q9NUG6 133 aa18.95■□□□□ 0.62
C11orf88-201ENST00000332814 PPP1R11O60927 126 aaPredicted RBP18.94■□□□□ 0.62
C11orf88-201ENST00000332814 ALDH5A1P51649 535 aaPredicted RBP18.94■□□□□ 0.62
C11orf88-201ENST00000332814 SLC35G1Q2M3R5 365 aa18.94■□□□□ 0.62
C11orf88-201ENST00000332814 C8orf34Q49A92 452 aa18.94■□□□□ 0.62
C11orf88-201ENST00000332814 ANKLE1Q8NAG6 615 aa18.94■□□□□ 0.62
C11orf88-201ENST00000332814 FGD4Q96M96 766 aa18.94■□□□□ 0.62
C11orf88-201ENST00000332814 HTTP42858 3142 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 LOC102724159A0A0B4J2E5 919 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 SNAI1O95863 264 aaPredicted RBP18.93■□□□□ 0.62
C11orf88-201ENST00000332814 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
C11orf88-201ENST00000332814 RARBP10826 455 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 ACVR2BQ13705 512 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 PWP2Q15269 919 aaKnown RBP18.93■□□□□ 0.62
C11orf88-201ENST00000332814 DNERQ8NFT8 737 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 PURBQ96QR8 312 aaKnown RBP18.93■□□□□ 0.62
C11orf88-201ENST00000332814 AGXT2Q9BYV1 514 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
C11orf88-201ENST00000332814 OGDHLQ9ULD0 1010 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 FAM184BQ9ULE4 1060 aa18.93■□□□□ 0.62
C11orf88-201ENST00000332814 ZNFX1Q9P2E3 1918 aaKnown RBP18.92■□□□□ 0.62
C11orf88-201ENST00000332814 GCOM1H8Y6P7 765 aaPredicted RBP18.92■□□□□ 0.62
C11orf88-201ENST00000332814 SEC24BO95487 1268 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 POLR2MP0CAP2 368 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 ZNF865P0CJ78 1059 aaPredicted RBP18.92■□□□□ 0.62
C11orf88-201ENST00000332814 PDE4DQ08499 809 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 ANO1Q5XXA6 986 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 SAMD3Q8N6K7 520 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 CUL5Q93034 780 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 MAP3K20Q9NYL2 800 aaKnown RBP18.92■□□□□ 0.62
C11orf88-201ENST00000332814 CNTNAP5Q8WYK1 1306 aa18.92■□□□□ 0.62
C11orf88-201ENST00000332814 AKAP17AQ02040 695 aaKnown RBP18.91■□□□□ 0.62
C11orf88-201ENST00000332814 ARHGEF16Q5VV41 709 aa18.91■□□□□ 0.62
C11orf88-201ENST00000332814 LHX8Q68G74 356 aa18.91■□□□□ 0.62
C11orf88-201ENST00000332814 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
C11orf88-201ENST00000332814 HEATR3Q7Z4Q2 680 aa18.91■□□□□ 0.62
C11orf88-201ENST00000332814 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
C11orf88-201ENST00000332814 ARRDC4Q8NCT1 418 aa18.91■□□□□ 0.62
C11orf88-201ENST00000332814 SYTL5Q8TDW5 730 aaPredicted RBP18.91■□□□□ 0.62
C11orf88-201ENST00000332814 NSUN6Q8TEA1 469 aaKnown RBP18.91■□□□□ 0.62
C11orf88-201ENST00000332814 hCG_1642624A0A1W2PR95 340 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 CDC27P30260 824 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 HSD17B4P51659 736 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 TOB2Q14106 344 aaPredicted RBP18.9■□□□□ 0.62
C11orf88-201ENST00000332814 ANKRD1Q15327 319 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
C11orf88-201ENST00000332814 SMARCC2Q8TAQ2 1214 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 TBC1D5Q92609 795 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 RMDN3Q96TC7 470 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 HTATIP2Q9BUP3 242 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 VTA1Q9NP79 307 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 XPNPEP3Q9NQH7 507 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 RBM27Q9P2N5 1060 aaKnown RBP18.9■□□□□ 0.62
C11orf88-201ENST00000332814 ASTN1O14525 1302 aa18.9■□□□□ 0.62
C11orf88-201ENST00000332814 KBTBD13C9JR72 458 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 CPLX1O14810 134 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 CCDC144BQ3MJ40 725 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 FBXO16Q8IX29 292 aaPredicted RBP18.89■□□□□ 0.61
C11orf88-201ENST00000332814 TAAR1Q96RJ0 339 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 SPC25Q9HBM1 224 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 MYH6P13533 1939 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 NID2Q14112 1375 aa18.89■□□□□ 0.61
C11orf88-201ENST00000332814 hCG_1984214I3L0E3 225 aa18.88■□□□□ 0.61
C11orf88-201ENST00000332814 PDIA3P30101 505 aaKnown RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 EVCP57679 992 aa18.88■□□□□ 0.61
C11orf88-201ENST00000332814 CCT2P78371 535 aaKnown RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 RNF180Q86T96 592 aa18.88■□□□□ 0.61
C11orf88-201ENST00000332814 FCHSD1Q86WN1 690 aa18.88■□□□□ 0.61
C11orf88-201ENST00000332814 ZNF713Q8N859 430 aaPredicted RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 MORC4Q8TE76 937 aa18.88■□□□□ 0.61
C11orf88-201ENST00000332814 GPKOWQ92917 476 aaPredicted RBP eCLIP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 PAWRQ96IZ0 340 aaKnown RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 C11orf49Q9H6J7 331 aa18.88■□□□□ 0.61
C11orf88-201ENST00000332814 V9GY48 417 aaPredicted RBP18.88■□□□□ 0.61
C11orf88-201ENST00000332814 DNM1LO00429 736 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 OPLAHO14841 1288 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 EIF2AK2P19525 551 aaKnown RBP18.87■□□□□ 0.61
C11orf88-201ENST00000332814 NAPAP54920 295 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 GHRHRQ02643 423 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 TNFAIP2Q03169 654 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 STK3Q13188 491 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 DIS3LQ8TF46 1054 aaKnown RBP18.87■□□□□ 0.61
C11orf88-201ENST00000332814 ZNF274Q96GC6 653 aaPredicted RBP18.87■□□□□ 0.61
C11orf88-201ENST00000332814 IWS1Q96ST2 819 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
C11orf88-201ENST00000332814 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
C11orf88-201ENST00000332814 DDX49Q9Y6V7 483 aaKnown RBP18.87■□□□□ 0.61
C11orf88-201ENST00000332814 DUSP11O75319 330 aaKnown RBP18.86■□□□□ 0.61
C11orf88-201ENST00000332814 EDNRBP24530 442 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 NEK4P51957 841 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 STXBP2Q15833 593 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 GJC2Q5T442 439 aaPredicted RBP18.86■□□□□ 0.61
C11orf88-201ENST00000332814 PPP1R18Q6NYC8 613 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms