RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 PNKPQ96T60 521 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CAPS2Q9BXY5 557 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ANKRD2Q9GZV1 360 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 DNAJC17Q9NVM6 304 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 DIP2BQ9P265 1576 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 PRPF3O43395 683 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 HEXIM1O94992 359 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ABL1P00519 1130 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 IL6STP40189 918 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 TNNC1P63316 161 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 GFPT1Q06210 699 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 NKX1-1Q15270 411 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 FAM26FQ5R3K3 315 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 HS2ST1Q7LGA3 356 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ERMNQ8TAM6 284 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 TMEM60Q9H2L4 133 aa10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ZNF335Q9H4Z2 1342 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-201ENST00000332246 FRMD3A2A2Y4 597 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 PLEKP08567 350 aaPredicted RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 DISC1Q9NRI5 854 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 PANK4Q9NVE7 773 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ARHGEF28Q8N1W1 1705 aaKnown RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 GYPCP04921 128 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CYP19A1P11511 503 aaPredicted RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 SLCO1A2P46721 670 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 IFT88Q13099 833 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 MICALCLQ6ZW33 695 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 IFT20Q8IY31 132 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CCDC51Q96ER9 411 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CABS1Q96KC9 395 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 NUP58Q9BVL2 599 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 DCP1AQ9NPI6 582 aaPredicted RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP40Q9NVE5 1235 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ZNF446Q9NWS9 450 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 PCDHA4Q9UN74 947 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 MINPP1Q9UNW1 487 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 FHOD1Q9Y613 1164 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 DLC1Q96QB1 1528 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CTNNA2P26232 953 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 TRIM58Q8NG06 486 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 WDR66Q8TBY9 1149 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 PANX2Q96RD6 677 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 PSTPIP2Q9H939 334 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CTTNBP2NLQ9P2B4 639 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 GGA1Q9UJY5 639 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 NEURL4Q96JN8 1562 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 SPOPO43791 374 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 TNFAIP3P21580 790 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 LONP1P36776 959 aaKnown RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 KIF11P52732 1056 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 MAP3K9P80192 1104 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L24Q0WX57 530 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 STK4Q13043 487 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 RBM43Q6ZSC3 357 aaKnown RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 CCDC84Q86UT8 332 aaPredicted RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 GOLGA5Q8TBA6 731 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 TACO1Q9BSH4 297 aaKnown RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
CSGALNACT1-201ENST00000332246 KRIT1O00522 736 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 BMP6P22004 513 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 CETN1Q12798 172 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 ANKRD42Q8N9B4 389 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 LARP4BQ92615 738 aaKnown RBP10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 CCDC127Q96BQ5 260 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 RWDD2AQ9UIY3 292 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 CCDC169A6NNP5 214 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 GBP2P32456 591 aaPredicted RBP10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 PPP1R7Q15435 360 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 NDST4Q9H3R1 872 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 ADD3Q9UEY8 706 aaKnown RBP10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 ANKARQ7Z5J8 1434 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 USP17L5A8MUK1 530 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 EXOC3O60645 756 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 SASH3O75995 380 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 GDF11O95390 407 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 TDP2O95551 362 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 HOXA13P31271 388 aaPredicted RBP10.83□□□□□ -0.68
CSGALNACT1-201ENST00000332246 NR1I3Q14994 352 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms