RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 TIMP1P01033 207 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 RPS6P62753 249 aaKnown RBP15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 FSCN1Q16658 493 aaKnown RBP15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 DUSP28Q4G0W2 176 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 C9orf50Q5SZB4 431 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 FBXO16Q8IX29 292 aaPredicted RBP15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 FAM126BQ8IXS8 530 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 AP5M1Q9H0R1 490 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
GTF3C6-201ENST00000329970 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 CD4P01730 458 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 CHMLP26374 656 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 FPGSQ05932 587 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 SEC23AQ15436 765 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 SLC30A10Q6XR72 485 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 PURBQ96QR8 312 aaKnown RBP15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 UBAC1Q9BSL1 405 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 STXBP5LQ9Y2K9 1186 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 ABCB11O95342 1321 aa15.88■□□□□ 0.13
GTF3C6-201ENST00000329970 B4DLN1 442 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 NKRFO15226 690 aaKnown RBP eCLIP15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 DYNC1LI2O43237 492 aaPredicted RBP15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 PARP1P09874 1014 aaKnown RBP15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 GOLGA8HP0CJ92 632 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 MRPL12P52815 198 aaKnown RBP15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 BEX3Q00994 111 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 MFSD5Q6N075 450 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 KIAA1211Q6ZU35 1233 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 NOL8Q76FK4 1167 aaKnown RBP15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 Q7L0L9 218 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 ADGRF4Q8IZF3 695 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 UBA5Q9GZZ9 404 aa15.87■□□□□ 0.13
GTF3C6-201ENST00000329970 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 CALML3P27482 149 aa15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 VTI1AQ96AJ9 217 aa15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 WDR11Q9BZH6 1224 aa15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 CDH23Q9H251 3354 aa15.86■□□□□ 0.13
GTF3C6-201ENST00000329970 TMEM265A0A087WTH1 108 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 SGSM2O43147 1006 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 CYP21A2P08686 494 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 GHRHRQ02643 423 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 TRDNQ13061 729 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 PPIGQ13427 754 aaKnown RBP eCLIP15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 ITGA7Q13683 1181 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 USH1GQ495M9 461 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 MCF2L2Q86YR7 1114 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 SAMD3Q8N6K7 520 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 SCFD2Q8WU76 684 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 MTMR8Q96EF0 704 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 POLR3EQ9NVU0 708 aa15.85■□□□□ 0.13
GTF3C6-201ENST00000329970 MYH7BA7E2Y1 1941 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 CPT1AP50416 773 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 EPHB4P54760 987 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 PDE4DQ08499 809 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 QRICH1Q2TAL8 776 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 ZNF697Q5TEC3 545 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 CYB5R4Q7L1T6 521 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 TMEM199Q8N511 208 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 CPVLQ9H3G5 476 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 JMJD4Q9H9V9 463 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 MAP3K20Q9NYL2 800 aaKnown RBP15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 MRPL11Q9Y3B7 192 aaKnown RBP15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 GRIN2DO15399 1336 aa15.84■□□□□ 0.13
GTF3C6-201ENST00000329970 PALM3A6NDB9 673 aaPredicted RBP15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 PTH1RQ03431 593 aa15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 PPP2R5BQ15173 497 aa15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 TMEM63BQ5T3F8 832 aa15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 SYTL5Q8TDW5 730 aaPredicted RBP15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 MAP4K1Q92918 833 aa15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 IWS1Q96ST2 819 aa15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 MAD2L2Q9UI95 211 aa15.83■□□□□ 0.12
GTF3C6-201ENST00000329970 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 A6NJR5 290 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 KPNA6O60684 536 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 PTGS1P23219 599 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 PURAQ00577 322 aaKnown RBP15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 TTLL4Q14679 1199 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 BRDTQ58F21 947 aaPredicted RBP15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 RASIP1Q5U651 963 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 STAG2Q8N3U4 1231 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 NCOA7Q8NI08 942 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 NSUN6Q8TEA1 469 aaKnown RBP15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 GUCD1Q96NT3 240 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 MTA3Q9BTC8 594 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 AMNQ9BXJ7 453 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 GBF1Q92538 1859 aa15.82■□□□□ 0.12
GTF3C6-201ENST00000329970 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.81■□□□□ 0.12
GTF3C6-201ENST00000329970 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.81■□□□□ 0.12
GTF3C6-201ENST00000329970 ERICH2A1L162 156 aa15.81■□□□□ 0.12
GTF3C6-201ENST00000329970 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms