RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 TTBK2Q6IQ55 1244 aa24.02■■□□□ 1.44
LIMS2-201ENST00000324938 KIFC2Q96AC6 838 aa24.02■■□□□ 1.44
LIMS2-201ENST00000324938 DNAJC18Q9H819 358 aa24.02■■□□□ 1.44
LIMS2-201ENST00000324938 LRWD1Q9UFC0 647 aa24.02■■□□□ 1.44
LIMS2-201ENST00000324938 GRB10Q13322 594 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 COBLL1Q53SF7 1204 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 TMTC1Q8IUR5 882 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 A0A1W2PQC6 194 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 ZBTB5O15062 677 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 CCNE1P24864 410 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 CREBRFQ8IUR6 639 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 ZFPM1Q8IX07 1006 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 CUL5Q93034 780 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 P2RX5Q93086 422 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.43
LIMS2-201ENST00000324938 NUP88Q99567 741 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-201ENST00000324938 DUSP9Q99956 384 aaKnown RBP24.01■■□□□ 1.43
LIMS2-201ENST00000324938 RAB34Q9BZG1 259 aa24.01■■□□□ 1.43
LIMS2-201ENST00000324938 DHX36Q9H2U1 1008 aaKnown RBP24.01■■□□□ 1.43
LIMS2-201ENST00000324938 BICDL2A1A5D9 508 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 APBA3O96018 575 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 TNNI2P48788 182 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 HDLBPQ00341 1268 aaKnown RBP24■■□□□ 1.43
LIMS2-201ENST00000324938 PDIA5Q14554 519 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 ERCC6LQ2NKX8 1250 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 STRIP1Q5VSL9 837 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 PPP4R3AQ6IN85 833 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 MB21D1Q8N884 522 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 UBE2Q2Q8WVN8 375 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 KCNQ5Q9NR82 932 aa24■■□□□ 1.43
LIMS2-201ENST00000324938 ATP2B2Q01814 1243 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 FBXO38Q6PIJ6 1188 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 ZNF507Q8TCN5 953 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 PNMA5Q96PV4 448 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 BLOC1S4Q9NUP1 217 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 MAGEC2Q9UBF1 373 aaPredicted RBP23.99■■□□□ 1.43
LIMS2-201ENST00000324938 RNF225M0QZC1 329 aaPredicted RBP23.99■■□□□ 1.43
LIMS2-201ENST00000324938 ERVK-24P63145 666 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 MAP3K9P80192 1104 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 STK4Q13043 487 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 UBE2SQ16763 222 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 CNNM4Q6P4Q7 775 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 KCTD1Q719H9 257 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 SV2BQ7L1I2 683 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 IDI2Q9BXS1 227 aa23.99■■□□□ 1.43
LIMS2-201ENST00000324938 RGPD3A6NKT7 1758 aaPredicted RBP23.98■■□□□ 1.43
LIMS2-201ENST00000324938 RGPD4Q7Z3J3 1758 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 USP17L10C9JJH3 530 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 SLC16A2P36021 539 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 MRPL12P52815 198 aaKnown RBP23.98■■□□□ 1.43
LIMS2-201ENST00000324938 DACT2Q5SW24 774 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 CYP26C1Q6V0L0 522 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 C2CD5Q86YS7 1000 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 KIAA0825Q8IV33 1275 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 CSGALNACT2Q8N6G5 542 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 MNS1Q8NEH6 495 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 TNS1Q9HBL0 1735 aaKnown RBP23.98■■□□□ 1.43
LIMS2-201ENST00000324938 STYK1Q6J9G0 422 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 MKL1Q969V6 931 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 MRFAP1Q9Y605 127 aa23.98■■□□□ 1.43
LIMS2-201ENST00000324938 TADA3O75528 432 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 SLURP2P0DP57 97 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 FCER1AP12319 257 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 KRT9P35527 623 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 MSL1Q68DK7 614 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 LARP4BQ92615 738 aaKnown RBP23.97■■□□□ 1.43
LIMS2-201ENST00000324938 CDK5RAP3Q96JB5 506 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 FAM198AQ9UFP1 575 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 PCDHAC2Q9Y5I4 1007 aa23.97■■□□□ 1.43
LIMS2-201ENST00000324938 POTEMA6NI47 508 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 ECE2O60344 883 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 NPM3O75607 178 aaKnown RBP23.96■■□□□ 1.43
LIMS2-201ENST00000324938 FAM114A1Q8IWE2 563 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 KIAA0895Q8NCT3 520 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 DCAF4Q8WV16 495 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 CARD6Q9BX69 1037 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 NYAP2Q9P242 653 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 PI4KBQ9UBF8 816 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 PVALEFA0A1B0GWK0 134 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 DDTLA6NHG4 134 aaPredicted RBP23.96■■□□□ 1.43
LIMS2-201ENST00000324938 EFCAB8A8MWE9 144 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 H2AFXP16104 143 aaPredicted RBP23.96■■□□□ 1.43
LIMS2-201ENST00000324938 GCFC2P16383 781 aaKnown RBP23.96■■□□□ 1.43
LIMS2-201ENST00000324938 DNM2P50570 870 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 CACNB3P54284 484 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 ANKRD40Q6AI12 368 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 UNC13DQ70J99 1090 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 LZTFL1Q9NQ48 299 aa23.96■■□□□ 1.43
LIMS2-201ENST00000324938 DDX41Q9UJV9 622 aaKnown RBP23.96■■□□□ 1.43
LIMS2-201ENST00000324938 TCP10Q12799 353 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 MCM6Q14566 821 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 TMEM119Q4V9L6 283 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 RAD54LQ92698 747 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 TUBGCP2Q9BSJ2 902 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 GLT8D2Q9H1C3 349 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 PSTPIP2Q9H939 334 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 KANSL2Q9H9L4 492 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 DDX25Q9UHL0 483 aaKnown RBP23.95■■□□□ 1.42
LIMS2-201ENST00000324938 ATF5Q9Y2D1 282 aaPredicted RBP23.95■■□□□ 1.42
LIMS2-201ENST00000324938 PSME4Q14997 1843 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms