RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ALAS1P13196 640 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 PRKG1Q13976 671 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 ERFEQ4G0M1 354 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 THAP9Q9H5L6 903 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 PRR36Q9H6K5 1346 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 TMEM232C9JQI7 657 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 ATP8B1O43520 1251 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 SORBS3O60504 671 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 ARMCX5Q6P1M9 558 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 THRAP3Q9Y2W1 955 aaKnown RBP11.96□□□□□ -0.5
SNRNP200-201ENST00000323853 TNNC2P02585 160 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 LMNB1P20700 586 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 PRKAB2O43741 272 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 VSTM4Q8IW00 320 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 LOC102724428A0A0B4J2F2 783 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 TROVE2P10155 538 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 ATF2P15336 505 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 ATP1A2P50993 1020 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 SIK1P57059 783 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.58e-7■■■■□ 19.9
SNRNP200-201ENST00000323853 PTPN21Q16825 1174 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 ABCB5Q2M3G0 1257 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 PIK3CAP42336 1068 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 SRPRBQ9Y5M8 271 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 SASH1O94885 1247 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 MYL1P05976 194 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 H2AFZP0C0S5 128 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 H2AFVQ71UI9 128 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 RETREG2Q8NC44 543 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 RIC8AQ9NPQ8 531 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 SEC31BQ9NQW1 1179 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 ENC1O14682 589 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 AFPP02771 609 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 ZBTB8OSQ8IWT0 167 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 TBC1D31Q96DN5 1066 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
SNRNP200-201ENST00000323853 SOWAHDA6NJG2 315 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 TTLL1O95922 423 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 SLFN14P0C7P3 912 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 GAP43P17677 238 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 MFAP3P55082 362 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 PPP2R5DQ14738 602 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 BBOF1Q8ND07 529 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 VCX3BQ9H321 246 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 PIH1D3Q9NQM4 214 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 GINS2Q9Y248 185 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 GUCY2DQ02846 1103 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 C2orf54Q08AI8 447 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 ADAT2Q7Z6V5 191 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 MLXIPQ9HAP2 919 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 TSPOAP1O95153 1857 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 PCDHA1Q9Y5I3 950 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 A0A087WWV3 80 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 THAP12O43422 761 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 APBA3O96018 575 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 SDCCAG8Q86SQ7 713 aaPredicted RBP11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 RNF10Q8N5U6 811 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 SLC17A8Q8NDX2 589 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 GLG1Q92896 1179 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 HOMER3Q9NSC5 361 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 STK38LQ9Y2H1 464 aa11.94□□□□□ -0.5
SNRNP200-201ENST00000323853 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 RASSF2P50749 326 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 EHHADHQ08426 723 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 ZBTB1Q9Y2K1 713 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 M0QZ92 97 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 MAN2A1Q16706 1144 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 NSMCE1Q8WV22 266 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 PIGSQ96S52 555 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 NLRP10Q86W26 655 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 KLHL14Q9P2G3 628 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 NOD1Q9Y239 953 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 RESP18Q5W5W9 173 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 KCTD1Q719H9 257 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 PGBD1Q96JS3 809 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 CCPG1Q9ULG6 757 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 DLATP10515 647 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 PPM1KQ8N3J5 372 aa11.93□□□□□ -0.5
SNRNP200-201ENST00000323853 ATP2A3Q93084 1043 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms