RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HOXB7P09629 217 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 HIBADHP31937 336 aaKnown RBP18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 LAD1O00515 517 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 TMED2Q15363 201 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 CUEDC2Q9H467 287 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 NOP53Q9NZM5 478 aaKnown RBP18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 SMCO2A6NFE2 343 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 ATG16L1Q676U5 607 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 RAP1GDS1P52306 607 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 NLRX1Q86UT6 975 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 KSR1Q8IVT5 923 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 PBKQ96KB5 322 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 LONP1P36776 959 aaKnown RBP18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 NDUFA8P51970 172 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 AOC3Q16853 763 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 ZSCAN10Q96SZ4 725 aaPredicted RBP18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 BLIDQ8IZY5 108 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 FAM81BQ96LP2 452 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 SPC25Q9HBM1 224 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 ZNF532Q9HCE3 1301 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 ATP5HO75947 161 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 KDM5DQ9BY66 1539 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 PARP10Q53GL7 1025 aa18.32■□□□□ 0.52
SMCHD1-201ENST00000320876 UFL1O94874 794 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 ECEL1O95672 775 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 IQCB1Q15051 598 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 PTPROQ16827 1216 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 KRT82Q9NSB4 513 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 PCDHA12Q9UN75 941 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 CNBD1Q8NA66 436 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 MAML1Q92585 1016 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 IVNS1ABPQ9Y6Y0 642 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 MAGEA9P43362 315 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 MYL7Q01449 175 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 MAGOHBQ96A72 148 aaKnown RBP18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 ZBED4O75132 1171 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 HEXIM1O94992 359 aaKnown RBP18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 TECP42680 631 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 RDH13Q8NBN7 331 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 STAMQ92783 540 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 FBLN1P23142 703 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 NNTQ13423 1086 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 OR52Z1P0C646 297 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 LPIN2Q92539 896 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 NVLO15381 856 aaKnown RBP18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 METTL13Q8N6R0 699 aa18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 CNOT6LQ96LI5 555 aaKnown RBP18.31■□□□□ 0.52
SMCHD1-201ENST00000320876 COPB1P53618 953 aaKnown RBP18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ADAM9Q13443 819 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 KLC3Q6P597 504 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 FGD4Q96M96 766 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 CLEC11AQ9Y240 323 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 OTUD7BQ6GQQ9 843 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 PPM1KQ8N3J5 372 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 MMS19Q96T76 1030 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 CASP14P31944 242 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ADCY2Q08462 1091 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ZBTB8OSQ8IWT0 167 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 EXOC1LA0A1B0GW35 172 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 H7C0C1 242 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ATP5OP48047 213 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ATP8A2Q9NTI2 1148 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 MYO1FO00160 1098 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 CFBP00751 764 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 FBXL13Q8NEE6 735 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 HESX1Q9UBX0 185 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 INTUQ9ULD6 942 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 SPAG7O75391 227 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 HSPA6P17066 643 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ARHGEF9O43307 516 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ZNF449Q6P9G9 518 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ZNF654Q8IZM8 581 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 SLC35F6Q8N357 371 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 TUBGCP2Q9BSJ2 902 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 ANGPTL3Q9Y5C1 460 aa18.3■□□□□ 0.52
SMCHD1-201ENST00000320876 DDB1Q16531 1140 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 HP1BP3Q5SSJ5 553 aaPredicted RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 NBPF3Q9H094 633 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 SEC31AO94979 1220 aaKnown RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 DLATP10515 647 aaKnown RBP18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 KRT10P13645 584 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 TIMM10P62072 90 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
SMCHD1-201ENST00000320876 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms