RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ACAD9Q9H845 621 aa15.58■□□□□ 0.08
PRPF18-201ENST00000320054 GCOM1H8Y6P7 765 aaPredicted RBP15.57■□□□□ 0.08
PRPF18-201ENST00000320054 NFIBO00712 420 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 POLR2MP0CAP2 368 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 VEGFBP49765 207 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 CCNA1P78396 465 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 FAM110CQ1W6H9 321 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 Q3C1V9 767 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
PRPF18-201ENST00000320054 MROH8Q9H579 483 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 ZFYVE28Q9HCC9 887 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 BIN2Q9UBW5 565 aaPredicted RBP15.57■□□□□ 0.08
PRPF18-201ENST00000320054 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
PRPF18-201ENST00000320054 CCDC194A0A1B0GVG4 234 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 CA12O43570 354 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 TLR2O60603 784 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 CFBP00751 764 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 BCRP11274 1271 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 HSPA6P17066 643 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 UBE2SQ16763 222 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 ATL3Q6DD88 541 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 USP17L6PQ6QN14 398 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 CLEC17AQ6ZS10 378 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 ANKRD13CQ8N6S4 541 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 HOMER2Q9NSB8 354 aa15.56■□□□□ 0.08
PRPF18-201ENST00000320054 PFASO15067 1338 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 PEX10O60683 326 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 TRAPPC10P48553 1259 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 NONOQ15233 471 aaKnown RBP eCLIP15.55■□□□□ 0.08
PRPF18-201ENST00000320054 RILPL1Q5EBL4 403 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 JAKMIP3Q5VZ66 844 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 C17orf99Q6UX52 265 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 RNF207Q6ZRF8 634 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 RASGRP4Q8TDF6 673 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 CFHR5Q9BXR6 569 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 TMEM260Q9NX78 707 aa15.55■□□□□ 0.08
PRPF18-201ENST00000320054 NOL7Q9UMY1 257 aaKnown RBP15.55■□□□□ 0.08
PRPF18-201ENST00000320054 SPDYE3A6NKU9 549 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 ERCC3P19447 782 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 HTRA3P83110 453 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 CRHR2Q13324 411 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 NOM1Q5C9Z4 860 aaKnown RBP15.54■□□□□ 0.08
PRPF18-201ENST00000320054 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
PRPF18-201ENST00000320054 PIK3AP1Q6ZUJ8 805 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 NCAPG2Q86XI2 1143 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 ZNF396Q96N95 335 aaPredicted RBP15.54■□□□□ 0.08
PRPF18-201ENST00000320054 EHMT1Q9H9B1 1298 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 A1CFQ9NQ94 594 aaKnown RBP15.54■□□□□ 0.08
PRPF18-201ENST00000320054 CYP39A1Q9NYL5 469 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 DOCK3Q8IZD9 2030 aa15.54■□□□□ 0.08
PRPF18-201ENST00000320054 FAM205CA6NFA0 338 aa15.53■□□□□ 0.08
PRPF18-201ENST00000320054 HOXA13P31271 388 aaPredicted RBP15.53■□□□□ 0.08
PRPF18-201ENST00000320054 RPS6P62753 249 aaKnown RBP15.53■□□□□ 0.08
PRPF18-201ENST00000320054 FAM173BQ6P4H8 233 aa15.53■□□□□ 0.08
PRPF18-201ENST00000320054 NSMFQ6X4W1 530 aa15.53■□□□□ 0.08
PRPF18-201ENST00000320054 SYTL5Q8TDW5 730 aaPredicted RBP15.53■□□□□ 0.08
PRPF18-201ENST00000320054 ANO3Q9BYT9 981 aa15.53■□□□□ 0.08
PRPF18-201ENST00000320054 CPA4Q9UI42 421 aa15.53■□□□□ 0.08
PRPF18-201ENST00000320054 LRRC37A2A6NM11 1700 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 FRMPD4Q14CM0 1322 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 MAPK4P31152 587 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 SREBF1P36956 1147 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 TOB1P50616 345 aaPredicted RBP15.52■□□□□ 0.08
PRPF18-201ENST00000320054 DNM1Q05193 864 aaKnown RBP15.52■□□□□ 0.08
PRPF18-201ENST00000320054 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
PRPF18-201ENST00000320054 SLC30A10Q6XR72 485 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 FCHSD1Q86WN1 690 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 ANKRD35Q8N283 1001 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 CRYGNQ8WXF5 182 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 NAP1L4Q99733 375 aaKnown RBP15.52■□□□□ 0.08
PRPF18-201ENST00000320054 PORCNQ9H237 461 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 CFAP45Q9UL16 551 aa15.52■□□□□ 0.08
PRPF18-201ENST00000320054 KIAA1217Q5T5P2 1943 aa15.52■□□□□ 0.07
PRPF18-201ENST00000320054 RPTORQ8N122 1335 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 STRNO43815 780 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 BAG4O95429 457 aaKnown RBP15.51■□□□□ 0.07
PRPF18-201ENST00000320054 FCER1AP12319 257 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 USP11P51784 963 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 KRT85P78386 507 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 ORC2Q13416 577 aaPredicted RBP15.51■□□□□ 0.07
PRPF18-201ENST00000320054 KCTD2Q14681 263 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 INF2Q27J81 1249 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 NEK8Q86SG6 692 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 ABRAQ8N0Z2 381 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 TBCKQ8TEA7 893 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 PGBD1Q96JS3 809 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 GBP4Q96PP9 640 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 EFCC1Q9HA90 598 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 POLR3EQ9NVU0 708 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 MCM3APO60318 1980 aa15.51■□□□□ 0.07
PRPF18-201ENST00000320054 DNAJC25-GNG10A0A024R161 153 aa15.5■□□□□ 0.07
PRPF18-201ENST00000320054 CYP3A4P08684 503 aa15.5■□□□□ 0.07
PRPF18-201ENST00000320054 FOXD4L6Q3SYB3 417 aaPredicted RBP15.5■□□□□ 0.07
PRPF18-201ENST00000320054 TTC38Q5R3I4 469 aa15.5■□□□□ 0.07
PRPF18-201ENST00000320054 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
PRPF18-201ENST00000320054 MOXD1Q6UVY6 613 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms