RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ERVK-24P63145 666 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 ZNF579Q8NAF0 562 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 CTAGE1Q96RT6 745 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 CABP5Q9NP86 173 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 MAD2L2Q9UI95 211 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 CUL4BQ13620 913 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 TTC31Q49AM3 519 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 CDKAL1Q5VV42 579 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 LARGE2Q8N3Y3 721 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 ZDHHC15Q96MV8 337 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 MED4Q9NPJ6 270 aa19.26■□□□□ 0.67
SCAMP4-201ENST00000316097 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 DDTLA6NHG4 134 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 COBLO75128 1261 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 PPP2R5BQ15173 497 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 USP17L2Q6R6M4 530 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 PACS2Q86VP3 889 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 NEDD1Q8NHV4 660 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 PRMT6Q96LA8 375 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 MYO6Q9UM54 1294 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 A0A087X0B3 334 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 RNF40O75150 1001 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 ARHGAP25P42331 645 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 GABPAQ06546 454 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
SCAMP4-201ENST00000316097 CDC25AP30304 524 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 TMTC1Q8IUR5 882 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 SLC16A10Q8TF71 515 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 CCDC51Q96ER9 411 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 FAM198AQ9UFP1 575 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 CYTH3O43739 400 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 TUBBP07437 444 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 SLF1Q9BQI6 1058 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
SCAMP4-201ENST00000316097 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 ANKS1AQ92625 1134 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 EPSTI1Q96J88 318 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 ABHD10Q9NUJ1 306 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 CEP131Q9UPN4 1083 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 MYH1P12882 1939 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 PSMD14O00487 310 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 WNT7AO00755 349 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 AMPD2Q01433 879 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 ICE2Q659A1 982 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 WDR93Q6P2C0 686 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 SH3BP5LQ7L8J4 393 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 CCDC148Q8NFR7 591 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 NUP88Q99567 741 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 PHF20Q9BVI0 1012 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
SCAMP4-201ENST00000316097 RNF225M0QZC1 329 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 FECHP22830 423 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 SHMT1P34896 483 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 GTF2A1P52655 376 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 AFAP1L1Q8TED9 768 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 DNAJC18Q9H819 358 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 MYO1AQ9UBC5 1043 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 CTNND2Q9UQB3 1225 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 COL4A5P29400 1685 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 N4BP3O15049 544 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 KIF5BP33176 963 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 CORO7P57737 925 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 ATP2B2Q01814 1243 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 NPY5RQ15761 445 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 SKIDA1Q1XH10 827 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 SUPT20HQ8NEM7 779 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 PAGE5Q96GU1 130 aa19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 SCAF8Q9UPN6 1271 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-201ENST00000316097 USP17L5A8MUK1 530 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 PPP1R3GB7ZBB8 358 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 SYF2O95926 243 aaKnown RBP19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 SCG2P13521 617 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 GRM4Q14833 912 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 CT47A1Q5JQC4 288 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 CYP26C1Q6V0L0 522 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 UBA5Q9GZZ9 404 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 VPS16Q9H269 839 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 TRIM10Q9UDY6 481 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 ITIH6Q6UXX5 1313 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 CLRN2A0PK11 232 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 DPYDQ12882 1025 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 KRT31Q15323 416 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 TYW1BQ6NUM6 668 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 GUCA1BQ9UMX6 200 aa19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 FRMPD2Q68DX3 1309 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-201ENST00000316097 KLRF2D3W0D1 207 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 STAMQ92783 540 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 PIM2Q9P1W9 311 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 DLEC1Q9Y238 1755 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 ENC1O14682 589 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 PPFIA4O75335 1185 aa19.2■□□□□ 0.66
SCAMP4-201ENST00000316097 PPM1EQ8WY54 764 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms