RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 SREBF2Q12772 1141 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 GRM1Q13255 1194 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.54
TUBB3-201ENST00000315491 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 MCTP2Q6DN12 878 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 TBC1D5Q92609 795 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 USP28Q96RU2 1077 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 SPATC1LQ9H0A9 340 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 ZCCHC17Q9NP64 241 aaKnown RBP18.42■□□□□ 0.54
TUBB3-201ENST00000315491 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 IGF2BP3O00425 579 aaKnown RBP eCLIP18.42■□□□□ 0.54
TUBB3-201ENST00000315491 TOB1P50616 345 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-201ENST00000315491 AP3B2Q13367 1082 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 RIOX2Q8IUF8 465 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 PGBD1Q96JS3 809 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 TXNRD2Q9NNW7 524 aa18.42■□□□□ 0.54
TUBB3-201ENST00000315491 HOXA13P31271 388 aaPredicted RBP18.41■□□□□ 0.54
TUBB3-201ENST00000315491 TRAPPC10P48553 1259 aa18.41■□□□□ 0.54
TUBB3-201ENST00000315491 GHRHRQ02643 423 aa18.41■□□□□ 0.54
TUBB3-201ENST00000315491 IFNL1Q8IU54 200 aa18.41■□□□□ 0.54
TUBB3-201ENST00000315491 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
TUBB3-201ENST00000315491 FTOQ9C0B1 505 aaKnown RBP eCLIP18.41■□□□□ 0.54
TUBB3-201ENST00000315491 SPDYE3A6NKU9 549 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 FIBPO43427 364 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 FOSP01100 380 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-201ENST00000315491 ATP2B1P20020 1258 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 GCLCP48506 637 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-201ENST00000315491 CEBPZQ03701 1054 aaKnown RBP18.4■□□□□ 0.54
TUBB3-201ENST00000315491 INF2Q27J81 1249 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 ANO1Q5XXA6 986 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 CHST13Q8NET6 341 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 MOV10L1Q9BXT6 1211 aaKnown RBP18.4■□□□□ 0.54
TUBB3-201ENST00000315491 ANO3Q9BYT9 981 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 ACAD9Q9H845 621 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 SMCHD1A6NHR9 2005 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 MYH15Q9Y2K3 1946 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 COPB2P35606 906 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 HSD17B4P51659 736 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 NOGQ13253 232 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 Q3C1V9 767 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 TBCKQ8TEA7 893 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 CAPNS2Q96L46 248 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 ZIC5Q96T25 663 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 SCAND2PQ9GZW5 306 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-201ENST00000315491 GDPD2Q9HCC8 539 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
TUBB3-201ENST00000315491 RTEL1Q9NZ71 1219 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 CLIC4Q9Y696 253 aa18.4■□□□□ 0.54
TUBB3-201ENST00000315491 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 GOLGA6L22H0YM25 854 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 SLC25A27O95847 323 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 MCM4P33991 863 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 TM4SF4P48230 202 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 ERVK-9P63128 1117 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 ERVK-24P63145 666 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 TTC38Q5R3I4 469 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 NSMFQ6X4W1 530 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 RNF207Q6ZRF8 634 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 FBXO40Q9UH90 709 aa18.39■□□□□ 0.53
TUBB3-201ENST00000315491 NASPP49321 788 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-201ENST00000315491 SF3A1Q15459 793 aaKnown RBP18.38■□□□□ 0.53
TUBB3-201ENST00000315491 TAF1CQ15572 869 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-201ENST00000315491 CSPP1Q1MSJ5 1256 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 NCAPG2Q86XI2 1143 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 SPATA32Q96LK8 384 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 MAF1Q9H063 256 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 PCDHB6Q9Y5E3 794 aa18.38■□□□□ 0.53
TUBB3-201ENST00000315491 WNT7AO00755 349 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 YEATS4O95619 227 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 XRCC6P12956 609 aaKnown RBP eCLIP18.37■□□□□ 0.53
TUBB3-201ENST00000315491 ERCC3P19447 782 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 RPS6P62753 249 aaKnown RBP18.37■□□□□ 0.53
TUBB3-201ENST00000315491 SLC30A10Q6XR72 485 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 SYTL5Q8TDW5 730 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-201ENST00000315491 LEO1Q8WVC0 666 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-201ENST00000315491 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.37■□□□□ 0.53
TUBB3-201ENST00000315491 STK38Q15208 465 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 TMEM87AQ8NBN3 555 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 LINC00301Q8NCQ3 95 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 EHMT1Q9H9B1 1298 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 A1CFQ9NQ94 594 aaKnown RBP18.37■□□□□ 0.53
TUBB3-201ENST00000315491 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
TUBB3-201ENST00000315491 AOC2O75106 756 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 CCNA1P78396 465 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 BAATQ14032 418 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-201ENST00000315491 HSP90AA2PQ14568 343 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-201ENST00000315491 ZNF174Q15697 407 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 LETM2Q2VYF4 491 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 SHCBP1Q8NEM2 672 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 NAP1L5Q96NT1 182 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-201ENST00000315491 CEP131Q9UPN4 1083 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 ADGRA2Q96PE1 1338 aa18.36■□□□□ 0.53
TUBB3-201ENST00000315491 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms