RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
SPAST-201ENST00000315285 CCNE1P24864 410 aa15.12■□□□□ 0.01
SPAST-201ENST00000315285 PABPC4Q13310 644 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPAST-201ENST00000315285 FMR1NBQ8N0W7 255 aaPredicted RBP15.12■□□□□ 0.01
SPAST-201ENST00000315285 BZW2Q9Y6E2 419 aaKnown RBP15.12■□□□□ 0.01
SPAST-201ENST00000315285 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
SPAST-201ENST00000315285 PABPN1LA6NDY0 278 aaKnown RBP15.12■□□□□ 0.01
SPAST-201ENST00000315285 CLCN6P51797 869 aa15.12■□□□□ 0.01
SPAST-201ENST00000315285 SUSD4Q5VX71 490 aa15.12■□□□□ 0.01
SPAST-201ENST00000315285 TESPA1A2RU30 521 aaPredicted RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 TTLL1O95922 423 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 RPAP1Q9BWH6 1393 aaPredicted RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 PLEKHA8P1O95397 391 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 GCFC2P16383 781 aaKnown RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 SLC8A3P57103 927 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 ZBED6P86452 979 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 HLFQ16534 295 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 ARL6IP4Q66PJ3 421 aaKnown RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 STAG1Q8WVM7 1258 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 TEKT3Q9BXF9 490 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 PARD6BQ9BYG5 372 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 ALAS1P13196 640 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 ADAT2Q7Z6V5 191 aaKnown RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 THAP9Q9H5L6 903 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 SSX2IPQ9Y2D8 614 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 APBA1Q02410 837 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 NAA25Q14CX7 972 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 XKR9Q5GH70 373 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 MB21D2Q8IYB1 491 aaPredicted RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 HOOK2Q96ED9 719 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 DYNLL2Q96FJ2 89 aa15.11■□□□□ 0.01
SPAST-201ENST00000315285 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
SPAST-201ENST00000315285 hCG_1984214I3L0E3 225 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 NDUFA10O95299 355 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 MECOMQ03112 1051 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 ZNF713Q8N859 430 aaPredicted RBP15.1■□□□□ 0.01
SPAST-201ENST00000315285 KRT12Q99456 494 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 THRAP3Q9Y2W1 955 aaKnown RBP15.1■□□□□ 0.01
SPAST-201ENST00000315285 WDR19Q8NEZ3 1342 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 PLCG1P19174 1290 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 ABCB5Q2M3G0 1257 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 ODR4Q5SWX8 454 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 FBXO38Q6PIJ6 1188 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 NEDD4P46934 1319 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 STK36Q9NRP7 1315 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 ZMYND10O75800 440 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 KRT19P08727 400 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 DMTNQ08495 405 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 KRT31Q15323 416 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 ARMCX5Q6P1M9 558 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 CYB5R4Q7L1T6 521 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 NIM1KQ8IY84 436 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 ANKRD42Q8N9B4 389 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 TTC16Q8NEE8 873 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 DEPTORQ8TB45 409 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 MGARPQ8TDB4 240 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 GINS2Q9Y248 185 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 CCDC170Q8IYT3 715 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 VPS37BQ9H9H4 285 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 HOMER3Q9NSC5 361 aa15.1■□□□□ 0.01
SPAST-201ENST00000315285 NRKQ7Z2Y5 1582 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 SNX16P57768 344 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 KRT26Q7Z3Y9 468 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 CACNA2D3Q8IZS8 1091 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 VTI1AQ96AJ9 217 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 C1orf112Q9NSG2 853 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 SERPINB13Q9UIV8 391 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 A0A1B0GUA9 196 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 TSGA10IPQ3SY00 556 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 KMT5BQ4FZB7 885 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 NAA35Q5VZE5 725 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 COA7Q96BR5 231 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 BRIP1Q9BX63 1249 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 NDC80O14777 642 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 MFAP3LO75121 409 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 CIB2O75838 187 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 MAP7D1Q3KQU3 841 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 TCP11X2Q5H9J9 407 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 KCTD1Q719H9 257 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 TCP10L2B9ZVM9 353 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 STX2P32856 288 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 PDE6CP51160 858 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 CCDC89Q8N998 374 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
SPAST-201ENST00000315285 DISC1Q9NRI5 854 aa15.09■□□□□ 0.01
SPAST-201ENST00000315285 USP17L3A6NCW0 530 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 USP17L4A6NCW7 530 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0.01
SPAST-201ENST00000315285 IFNB1P01574 187 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 SLC16A2P36021 539 aa15.08■□□□□ 0.01
SPAST-201ENST00000315285 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0.01
SPAST-201ENST00000315285 LRCH2Q5VUJ6 765 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms