RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SLU7O95391 586 aaKnown RBP14.86□□□□□ -0.03
RFFL-201ENST00000315249 EXOC8Q8IYI6 725 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 CCDC26Q8TAB7 109 aa14.86□□□□□ -0.03
RFFL-201ENST00000315249 UBLCP1Q8WVY7 318 aaPredicted RBP14.86□□□□□ -0.03
RFFL-201ENST00000315249 TULP4Q9NRJ4 1543 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 APOA5Q6Q788 366 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 NAP1L3Q99457 506 aaPredicted RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 ARMCX3Q9UH62 379 aaPredicted RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 ABCA9Q8IUA7 1624 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 TYW1BQ6NUM6 668 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 SP8Q8IXZ3 490 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 ZBBXA8MT70 800 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 ATP2C2O75185 946 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 RC3H1Q5TC82 1133 aaKnown RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 SNRNP48Q6IEG0 339 aaKnown RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 RSRC2Q7L4I2 434 aaKnown RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 SYMPKQ92797 1274 aaKnown RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 WDR11Q9BZH6 1224 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 GADD45BO75293 160 aaPredicted RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 STAT1P42224 750 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 ADALQ6DHV7 355 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 TRERF1Q96PN7 1200 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 ELP3Q9H9T3 547 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 CYP21A2P08686 494 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 SEPT2Q15019 361 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 TRIM50Q86XT4 487 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 PPM1EQ8WY54 764 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 KIF9Q9HAQ2 790 aa14.85□□□□□ -0.03
RFFL-201ENST00000315249 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
RFFL-201ENST00000315249 PFKFB1P16118 471 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 CBX1P83916 185 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 ADCK5Q3MIX3 580 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 SLFNL1Q499Z3 407 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 SYT10Q6XYQ8 523 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.84□□□□□ -0.03
RFFL-201ENST00000315249 HACL1Q9UJ83 578 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 V9GYY5 206 aaPredicted RBP14.84□□□□□ -0.03
RFFL-201ENST00000315249 PSAPP07602 524 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
RFFL-201ENST00000315249 LINC00116Q8NCU8 138 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 MMP19Q99542 508 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 SNX25Q9H3E2 840 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 TRIM31Q9BZY9 425 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 SCAF8Q9UPN6 1271 aaKnown RBP14.84□□□□□ -0.03
RFFL-201ENST00000315249 GPR161Q8N6U8 529 aaKnown RBP14.84□□□□□ -0.03
RFFL-201ENST00000315249 RMDN3Q96TC7 470 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 CFAP157Q5JU67 520 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 USP28Q96RU2 1077 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 SEPT10Q9P0V9 454 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 CLIC4Q9Y696 253 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 ELF1P32519 619 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 ITIH3Q06033 890 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 MFSD14CQ5VZR4 134 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 C7orf31Q8N865 590 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 CCDC89Q8N998 374 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 NACC1Q96RE7 527 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 ARFGAP3Q9NP61 516 aa14.84□□□□□ -0.03
RFFL-201ENST00000315249 STAM2O75886 525 aa14.83□□□□□ -0.03
RFFL-201ENST00000315249 ADAM9Q13443 819 aa14.83□□□□□ -0.03
RFFL-201ENST00000315249 ZNRF3Q9ULT6 936 aa14.83□□□□□ -0.03
RFFL-201ENST00000315249 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 SLC44A5Q8NCS7 719 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 U2AF1L4Q8WU68 220 aaKnown RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 TMEM106CQ9BVX2 250 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 IGKV5-2P06315 115 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 NOLC1Q14978 699 aaKnown RBP eCLIP14.83□□□□□ -0.04
RFFL-201ENST00000315249 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.83□□□□□ -0.04
RFFL-201ENST00000315249 MARCH10Q8NA82 808 aaPredicted RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 GABPB2Q8TAK5 448 aaPredicted RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 PCIF1Q9H4Z3 704 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 MAP7D1Q3KQU3 841 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 SLITRK6Q9H5Y7 841 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 PCDHB4Q9Y5E5 795 aa14.83□□□□□ -0.04
RFFL-201ENST00000315249 RPN1P04843 607 aaKnown RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
RFFL-201ENST00000315249 PRAMEF18Q5VWM3 479 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 MAP4K1Q92918 833 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 ASIC3Q9UHC3 531 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 MAGEA1P43355 309 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 VAV2P52735 878 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 MORC3Q14149 939 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 FAM26FQ5R3K3 315 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 GBP6Q6ZN66 633 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 RYBPQ8N488 228 aaPredicted RBP14.82□□□□□ -0.04
RFFL-201ENST00000315249 INPP5FQ9Y2H2 1132 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 GIPC1O14908 333 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 COBLO75128 1261 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 CYP2E1P05181 493 aaPredicted RBP14.82□□□□□ -0.04
RFFL-201ENST00000315249 LONP1P36776 959 aaKnown RBP14.82□□□□□ -0.04
RFFL-201ENST00000315249 PDE6CP51160 858 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 MICALCLQ6ZW33 695 aa14.82□□□□□ -0.04
RFFL-201ENST00000315249 TYW5A2RUC4 315 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms