RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 PDIA5Q14554 519 aa21.43■■□□□ 1.02
CD55-201ENST00000314754 ANKRD20A12PQ8NF67 263 aa21.43■■□□□ 1.02
CD55-201ENST00000314754 PRMT6Q96LA8 375 aaPredicted RBP21.43■■□□□ 1.02
CD55-201ENST00000314754 C7orf25Q9BPX7 421 aa21.43■■□□□ 1.02
CD55-201ENST00000314754 LRWD1Q9UFC0 647 aa21.43■■□□□ 1.02
CD55-201ENST00000314754 COL4A5P29400 1685 aa21.42■■□□□ 1.02
CD55-201ENST00000314754 H7C1D1 291 aa21.42■■□□□ 1.02
CD55-201ENST00000314754 ADKP55263 362 aaKnown RBP21.42■■□□□ 1.02
CD55-201ENST00000314754 KRT31Q15323 416 aa21.42■■□□□ 1.02
CD55-201ENST00000314754 QRICH1Q2TAL8 776 aa21.42■■□□□ 1.02
CD55-201ENST00000314754 GMCL1P1Q8NEA9 526 aa21.42■■□□□ 1.02
CD55-201ENST00000314754 CCDC47Q96A33 483 aaKnown RBP21.42■■□□□ 1.02
CD55-201ENST00000314754 GTPBP4Q9BZE4 634 aaKnown RBP21.42■■□□□ 1.02
CD55-201ENST00000314754 PDCL3Q9H2J4 239 aa21.42■■□□□ 1.02
CD55-201ENST00000314754 GCFC2P16383 781 aaKnown RBP21.41■■□□□ 1.02
CD55-201ENST00000314754 JAG1P78504 1218 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 TCP11X2Q5H9J9 407 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 TTLL6Q8N841 843 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 STK17AQ9UEE5 414 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 PSMA7O14818 248 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 CCDC93Q567U6 631 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 PANX2Q96RD6 677 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 ATF5Q9Y2D1 282 aaPredicted RBP21.41■■□□□ 1.02
CD55-201ENST00000314754 ITIH6Q6UXX5 1313 aa21.41■■□□□ 1.02
CD55-201ENST00000314754 KCNJ18B7U540 433 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 AKR1B15C9JRZ8 316 aaPredicted RBP21.4■■□□□ 1.02
CD55-201ENST00000314754 KCNJ12Q14500 433 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 CDC37Q16543 378 aaPredicted RBP21.4■■□□□ 1.02
CD55-201ENST00000314754 GMCL1Q96IK5 515 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 CSRNP1Q96S65 589 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 PSMD1Q99460 953 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 NAP1L4Q99733 375 aaKnown RBP21.4■■□□□ 1.02
CD55-201ENST00000314754 PCDHA1Q9Y5I3 950 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 F5H6K3 240 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 KLRC3Q07444 240 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 GRB10Q13322 594 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 PPFIBP1Q86W92 1011 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 EXOC1Q9NV70 894 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 TMOD2Q9NZR1 351 aa21.4■■□□□ 1.02
CD55-201ENST00000314754 DDX25Q9UHL0 483 aaKnown RBP21.4■■□□□ 1.02
CD55-201ENST00000314754 N4BP3O15049 544 aa21.39■■□□□ 1.01
CD55-201ENST00000314754 ZSCAN12O43309 604 aa21.39■■□□□ 1.01
CD55-201ENST00000314754 CCT6AP40227 531 aaKnown RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 ASIC1P78348 528 aa21.39■■□□□ 1.01
CD55-201ENST00000314754 RRP1BQ14684 758 aaKnown RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 RBM26Q5T8P6 1007 aaKnown RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 RSBN1LQ6PCB5 846 aaPredicted RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 SPDYE2BA6NHP3 402 aa21.39■■□□□ 1.01
CD55-201ENST00000314754 SPDYE6P0CI01 402 aa21.39■■□□□ 1.01
CD55-201ENST00000314754 COPB1P53618 953 aaKnown RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 MTERF4Q7Z6M4 381 aaKnown RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 DHTKD1Q96HY7 919 aaPredicted RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 MAP7D2Q96T17 732 aa21.39■■□□□ 1.01
CD55-201ENST00000314754 HERC5Q9UII4 1024 aaKnown RBP21.39■■□□□ 1.01
CD55-201ENST00000314754 SMCHD1A6NHR9 2005 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 TRIM49BA6NDI0 452 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 POTEMA6NI47 508 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 NDUFB10O96000 172 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 GH2P01242 217 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 PPP1R2P41236 205 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 SV2BQ7L1I2 683 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 CDK5RAP3Q96JB5 506 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 NUP88Q99567 741 aaPredicted RBP21.38■■□□□ 1.01
CD55-201ENST00000314754 BLOC1S4Q9NUP1 217 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 SYNPO2Q9UMS6 1093 aa21.38■■□□□ 1.01
CD55-201ENST00000314754 PMS1P54277 932 aaKnown RBP21.37■■□□□ 1.01
CD55-201ENST00000314754 PDE4DQ08499 809 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 RBL2Q08999 1139 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 KRT79Q5XKE5 535 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 REXO1L1PQ8IX06 675 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 THAP9Q9H5L6 903 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 VIL1P09327 827 aaKnown RBP21.37■■□□□ 1.01
CD55-201ENST00000314754 SNAP25P60880 206 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 TTI2Q6NXR4 508 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 IRF2BP1Q8IU81 584 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 HAS1Q92839 578 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 GJA10Q969M2 543 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 PNMA5Q96PV4 448 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 GMLQ99445 158 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 NAA15Q9BXJ9 866 aaKnown RBP21.37■■□□□ 1.01
CD55-201ENST00000314754 PPP2R2CQ9Y2T4 447 aa21.37■■□□□ 1.01
CD55-201ENST00000314754 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.37■■□□□ 1.01
CD55-201ENST00000314754 USP17L15C9J2P7 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L13C9JLJ4 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L11C9JVI0 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L18D6R9N7 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L22D6RA61 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L17D6RBQ6 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L19D6RCP7 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L20D6RJB6 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 RAD17O75943 681 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 EEF1GP26641 437 aaKnown RBP21.36■■□□□ 1.01
CD55-201ENST00000314754 ETF1P62495 437 aaKnown RBP21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L24Q0WX57 530 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 COBLL1Q53SF7 1204 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 USP17L6PQ6QN14 398 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 SNX29Q8TEQ0 813 aa21.36■■□□□ 1.01
CD55-201ENST00000314754 NOC3LQ8WTT2 800 aaKnown RBP21.36■■□□□ 1.01
CD55-201ENST00000314754 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms