RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 HPS5Q9UPZ3 1129 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 DNM3Q9UQ16 869 aa6.69□□□□□ -1.34
SEC22A-201ENST00000309934 CNTNAP5Q8WYK1 1306 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 FSD2A1L4K1 749 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 PSMD14O00487 310 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CCDC175P0C221 793 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CDC37Q16543 378 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CKAP2LQ8IYA6 745 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 EHBP1Q8NDI1 1231 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CCDC51Q96ER9 411 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 MRFAP1L1Q96HT8 127 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 SLF1Q9BQI6 1058 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 JPH2Q9BR39 696 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 TIPINQ9BVW5 301 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ZMYND12Q9H0C1 365 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 IL25Q9H293 177 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ACBD3Q9H3P7 528 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ZNF277Q9NRM2 450 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 KCNJ14Q9UNX9 436 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 DAAM1Q9Y4D1 1078 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 COL1A1P02452 1464 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 C4AP0C0L4 1744 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 SNAP23O00161 211 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 STX10O60499 249 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ASIC1P78348 528 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 FASTKD5Q7L8L6 764 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 OTUD6AQ7L8S5 288 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 GPC2Q8N158 579 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 LRRC47Q8N1G4 583 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 PRPF38AQ8NAV1 312 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 RUFY1Q96T51 708 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 TEKT3Q9BXF9 490 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 TDRD3Q9H7E2 651 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 SPATS2LQ9NUQ6 558 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 DDX25Q9UHL0 483 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ZBTB7AO95365 584 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CCT6AP40227 531 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ATP2C1P98194 919 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 RMI1Q9H9A7 625 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 FRMD4BQ9Y2L6 1034 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 PITPNM2Q9BZ72 1349 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 A0A0G2JLW4 131 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CALUO43852 315 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 HOXC6P09630 235 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CYP2D6P10635 497 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CDC27P30260 824 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 OAZ1P54368 228 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 KCNV1Q6PIU1 500 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 DHTKD1Q96HY7 919 aaPredicted RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CEP89Q96ST8 783 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 NAA15Q9BXJ9 866 aaKnown RBP6.68□□□□□ -1.34
SEC22A-201ENST00000309934 CXorf56Q9H5V9 222 aa6.68□□□□□ -1.34
SEC22A-201ENST00000309934 ADCY5O95622 1261 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 EEF2P13639 858 aaKnown RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CASQ1P31415 396 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 RHBDL3P58872 404 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 ARHGEF6Q15052 776 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 BRDTQ58F21 947 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 IQCEQ6IPM2 695 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 HS2ST1Q7LGA3 356 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 KIAA1328Q86T90 577 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PIGSQ96S52 555 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 RIOX1Q9H6W3 641 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 VCPKMTQ9H867 229 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 ADARB2Q9NS39 739 aaKnown RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CCPG1Q9ULG6 757 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PCDHA12Q9UN75 941 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CLEC11AQ9Y240 323 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 A0A1B0GVL5 298 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 HMGB1P1B2RPK0 211 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 F5H6K3 240 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PPP1R12AO14974 1030 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 POLR3GO15318 223 aaPredicted RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 GH2P01242 217 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 KLRC3Q07444 240 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PTGDRQ13258 359 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 SLC4A8Q2Y0W8 1093 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 JAKMIP3Q5VZ66 844 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 RDM1Q8NG50 284 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 SNX29Q8TEQ0 813 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 TRIM47Q96LD4 638 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 PPP1R9BQ96SB3 815 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CCSER1Q9C0I3 900 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CNOT7Q9UIV1 285 aaKnown RBP6.67□□□□□ -1.34
SEC22A-201ENST00000309934 ZBTB21Q9ULJ3 1066 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 ZDHHC9Q9Y397 364 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 ATRNL1Q5VV63 1379 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 MYPNQ86TC9 1320 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 TIAM2Q8IVF5 1701 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 CYP2D7A0A087X1C5 515 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L15C9J2P7 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L13C9JLJ4 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L11C9JVI0 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L18D6R9N7 530 aa6.67□□□□□ -1.34
SEC22A-201ENST00000309934 USP17L22D6RA61 530 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms