RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 PCDHA13Q9Y5I0 950 aa15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 PLCG1P19174 1290 aa15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 ZBED6P86452 979 aa15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 CHRNDQ07001 517 aa15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 STAG2Q8N3U4 1231 aa15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 RBM12Q9NTZ6 932 aaKnown RBP15.98■□□□□ 0.15
SCUBE2-201ENST00000309263 EIF3HO15372 352 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 LRRC41Q15345 812 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 CCNT1O60563 726 aaKnown RBP15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 ZHX3Q9H4I2 956 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 MCM9Q9NXL9 1143 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 ZNF263O14978 683 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 EPHB6O15197 1021 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 HNRNPH1P31943 449 aaKnown RBP15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 CARSP49589 748 aaKnown RBP15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 AMOTL1Q8IY63 956 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 STIM2Q9P246 746 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 MYH10P35580 1976 aa15.97■□□□□ 0.15
SCUBE2-201ENST00000309263 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 TARSL2A2RTX5 802 aaKnown RBP15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 IFT88Q13099 833 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 CREG2Q8IUH2 290 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 P2RX5Q93086 422 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 CDK5RAP3Q96JB5 506 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 ZIM3Q96PE6 472 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 KRT12Q99456 494 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 TBC1D7Q9P0N9 293 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 E7EVH7 732 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 TXKP42681 527 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 CABP7Q86V35 215 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 MARCH6O60337 910 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 LONP1P36776 959 aaKnown RBP15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 NPY5RQ15761 445 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 CEP57Q86XR8 500 aa15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 PYM1Q9BRP8 204 aaKnown RBP15.96■□□□□ 0.15
SCUBE2-201ENST00000309263 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.14
SCUBE2-201ENST00000309263 CNTNAP5Q8WYK1 1306 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 LRRC53A6NM62 1247 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 CALM1P0DP23 149 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 CALM2P0DP24 149 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 CALM3P0DP25 149 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 SRGNP10124 158 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 RDXP35241 583 aaKnown RBP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 FUT2Q10981 343 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 MYCBPQ99417 103 aaPredicted RBP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 MKNK2Q9HBH9 465 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 NIP7Q9Y221 180 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 HYOU1Q9Y4L1 999 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 C4AP0C0L4 1744 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 C4BP0C0L5 1744 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 FAM153BP0C7A2 387 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 EHHADHQ08426 723 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 TRADDQ15628 312 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 FAM153CQ494X1 144 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 TTMPQ5BVD1 217 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 CEP85LQ5SZL2 805 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 DNAAF5Q86Y56 855 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 ZNF512BQ96KM6 892 aaPredicted RBP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 FAM153AQ9UHL3 310 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 AFF2P51816 1311 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 PDS5AQ29RF7 1337 aaKnown RBP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 SPATA31A5Q5VU36 1347 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 SPATA31A7Q8IWB4 1347 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 GOLGA8KD6RF30 607 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 EPHB4P54760 987 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 DDB1Q16531 1140 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 TXNRD1Q16881 649 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 NAALADL2Q58DX5 795 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 FNBP4Q8N3X1 1017 aaPredicted RBP15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 NUP58Q9BVL2 599 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 THAP9Q9H5L6 903 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 ARHGAP20Q9P2F6 1191 aa15.95■□□□□ 0.14
SCUBE2-201ENST00000309263 GOLGA6L10A6NI86 522 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 FGFR2P21802 821 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 TFAP4Q01664 338 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 TTI2Q6NXR4 508 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 ZNF507Q8TCN5 953 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 CDCA7Q9BWT1 371 aaPredicted RBP15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 GOLPH3Q9H4A6 298 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 KIF5BP33176 963 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 MAP2K2P36507 400 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 CAVIN4Q5BKX8 364 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 AENQ8WTP8 325 aaKnown RBP15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 RNPC3Q96LT9 517 aaKnown RBP15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 SLIT2O94813 1529 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 A0A1W2PQC6 194 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 FECHP22830 423 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 CALML3P27482 149 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 SLC1A4P43007 532 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 FAM114A1Q8IWE2 563 aa15.94■□□□□ 0.14
SCUBE2-201ENST00000309263 CCDC170Q8IYT3 715 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms