RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PFKFB3Q16875 520 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-201ENST00000309017 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 TNFRSF25Q93038 417 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 SH2D4AQ9H788 454 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 ADAMTS3O15072 1205 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 AMPD3Q01432 767 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 STK4Q13043 487 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 PAK2Q13177 524 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 KCNB1Q14721 858 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 NPY5RQ15761 445 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 GIMAP8Q8ND71 665 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-201ENST00000309017 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
PTPN7-201ENST00000309017 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 MYO1FO00160 1098 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 ATP2C2O75185 946 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 LUC7LQ9NQ29 371 aaKnown RBP12.36□□□□□ -0.43
PTPN7-201ENST00000309017 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
PTPN7-201ENST00000309017 JAG2Q9Y219 1238 aa12.36□□□□□ -0.43
PTPN7-201ENST00000309017 E7EVH7 732 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 RHOBTB3O94955 611 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CPP00450 1065 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 SUGP1Q8IWZ8 645 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CALML4Q96GE6 196 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 MYO5AQ9Y4I1 1855 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 A6NNZ2 444 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CCNT1O60563 726 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 TUBB8Q3ZCM7 444 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 TTMPQ5BVD1 217 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 TAF4BQ92750 862 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CABS1Q96KC9 395 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 KRT12Q99456 494 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 DUSP9Q99956 384 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 GEMIN8Q9NWZ8 242 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 TJP1Q07157 1748 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 LRRC53A6NM62 1247 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 ZNF263O14978 683 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 FTCDO95954 541 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 NR1D1P20393 614 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CARSP49589 748 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 APBA1Q02410 837 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 IFT88Q13099 833 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 NAALADL2Q58DX5 795 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CEP85LQ5SZL2 805 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 HAUS3Q68CZ6 603 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CNNM4Q6P4Q7 775 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 GIMAP7Q8NHV1 300 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
PTPN7-201ENST00000309017 MKNK2Q9HBH9 465 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 FER1L4A9Z1Z3 1794 aa12.35□□□□□ -0.43
PTPN7-201ENST00000309017 ZSCAN5CA6NGD5 496 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-201ENST00000309017 MARCH6O60337 910 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPN7-201ENST00000309017 TECP42680 631 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 CCDC40Q4G0X9 1142 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 NDST4Q9H3R1 872 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 ARHGAP20Q9P2F6 1191 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 CYP2D6P10635 497 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 EPS15P42566 896 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 EVX2Q03828 476 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 PTPROQ16827 1216 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 VAT1LQ9HCJ6 419 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 SEC24CP53992 1094 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-201ENST00000309017 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
PTPN7-201ENST00000309017 CEP89Q96ST8 783 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 ECM29Q5VYK3 1845 aa12.34□□□□□ -0.43
PTPN7-201ENST00000309017 KLRC4O43908 158 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 FGFR1OPO95684 399 aaKnown RBP12.33□□□□□ -0.43
PTPN7-201ENST00000309017 NAPAP54920 295 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 TXNRD1Q16881 649 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 VWA3BQ502W6 1294 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 PNMA1Q8ND90 353 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 TRIM9Q9C026 710 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 GRIN2DO15399 1336 aa12.33□□□□□ -0.43
PTPN7-201ENST00000309017 MEFVO15553 781 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-201ENST00000309017 MYL1P05976 194 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 LSP1P33241 339 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 SLC1A4P43007 532 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 TFAP4Q01664 338 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 EHHADHQ08426 723 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 CCDC114Q96M63 670 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-201ENST00000309017 PLAGL2Q9UPG8 496 aa12.33□□□□□ -0.44
PTPN7-201ENST00000309017 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPN7-201ENST00000309017 MYH6P13533 1939 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms