RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 LRRN4CLQ8ND94 238 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 LARP4BQ92615 738 aaKnown RBP11.88□□□□□ -0.51
MUC4-201ENST00000308466 CHP1Q99653 195 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
MUC4-201ENST00000308466 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 PPP1R3GB7ZBB8 358 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
MUC4-201ENST00000308466 RASA1P20936 1047 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 SLC24A3Q9HC58 644 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 SAR1BQ9Y6B6 198 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 NEBLO76041 1014 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 NDUFA10O95299 355 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 FCER1AP12319 257 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 SNAP25P60880 206 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 SH3GLB2Q9NR46 395 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
MUC4-201ENST00000308466 MORC2Q9Y6X9 1032 aaPredicted RBP11.88□□□□□ -0.51
MUC4-201ENST00000308466 LAD1O00515 517 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 CCNE1P24864 410 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 EEF1GP26641 437 aaKnown RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 PPP1R2P41236 205 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 PRR16Q569H4 304 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 HDXQ7Z353 690 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 RABGGTAQ92696 567 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 AK8Q96MA6 479 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 IFIH1Q9BYX4 1025 aaKnown RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 ZMYND10O75800 440 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 TTLL1O95922 423 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 USP8P40818 1118 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 CYP4A11Q02928 519 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 GRIK5Q16478 980 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 SYCP3Q8IZU3 236 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 MXD3Q9BW11 206 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 RABEP2Q9H5N1 569 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 POLD4Q9HCU8 107 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.87□□□□□ -0.51
MUC4-201ENST00000308466 TDP2O95551 362 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 MCM3P25205 808 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 HLTFQ14527 1009 aaKnown RBP eCLIP11.87□□□□□ -0.51
MUC4-201ENST00000308466 CERKLQ49MI3 558 aaPredicted RBP11.87□□□□□ -0.51
MUC4-201ENST00000308466 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 MYOCDQ8IZQ8 938 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 IL17RBQ9NRM6 502 aa11.87□□□□□ -0.51
MUC4-201ENST00000308466 C5P01031 1676 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 CFBP00751 764 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 AKR1B1P15121 316 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 SLC20A2Q08357 652 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
MUC4-201ENST00000308466 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 CCDC84Q86UT8 332 aaPredicted RBP11.86□□□□□ -0.51
MUC4-201ENST00000308466 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
MUC4-201ENST00000308466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
MUC4-201ENST00000308466 KCNJ6P48051 423 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 SARSP49591 514 aaKnown RBP11.86□□□□□ -0.51
MUC4-201ENST00000308466 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
MUC4-201ENST00000308466 SUFUQ9UMX1 484 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 CETN3O15182 167 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 GDF11O95390 407 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 GYPCP04921 128 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 PRPF4BQ13523 1007 aaKnown RBP11.86□□□□□ -0.51
MUC4-201ENST00000308466 PTPROQ16827 1216 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 LONRF2Q1L5Z9 754 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 ASPRV1Q53RT3 343 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 USP17L6PQ6QN14 398 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 VPS36Q86VN1 386 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
MUC4-201ENST00000308466 INTS13Q9NVM9 706 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms