RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
COL4A3-201ENST00000304990 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 BAIAP3O94812 1187 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 IQCF3P0C7M6 154 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 KCNA5P22460 613 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 UBE3CQ15386 1083 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 OR6J1Q8NGC5 347 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 KIF1BPQ96EK5 621 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 LMCD1Q9NZU5 365 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 RAD50Q92878 1312 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 PTPRSQ13332 1948 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
COL4A3-201ENST00000304990 TTLL1O95922 423 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 PURAQ00577 322 aaKnown RBP12□□□□□ -0.49
COL4A3-201ENST00000304990 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 TAPT1Q6NXT6 567 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 FAM160B2Q86V87 743 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 FAM178BQ8IXR5 827 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
COL4A3-201ENST00000304990 GMCL1P1Q8NEA9 526 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 VWCEQ96DN2 955 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 CEP95Q96GE4 821 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 WDR11Q9BZH6 1224 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 ADD3Q9UEY8 706 aaKnown RBP12□□□□□ -0.49
COL4A3-201ENST00000304990 SIP14410 1827 aa12□□□□□ -0.49
COL4A3-201ENST00000304990 LPXNO60711 386 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 PRDM1O75626 825 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 CHGBP05060 677 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 APPP05067 770 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 IL9P15248 144 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 TDO2P48775 406 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 NHLH1Q02575 133 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 LEXMQ3ZCV2 418 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 DUSP28Q4G0W2 176 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 SBK1Q52WX2 424 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 PTCRAQ6ISU1 281 aaPredicted RBP11.99□□□□□ -0.49
COL4A3-201ENST00000304990 EP400NLQ6ZTU2 488 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 SPRED2Q7Z698 418 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 PPP1R13LQ8WUF5 828 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 SNX27Q96L92 541 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
COL4A3-201ENST00000304990 CYP39A1Q9NYL5 469 aa11.99□□□□□ -0.49
COL4A3-201ENST00000304990 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
COL4A3-201ENST00000304990 REV3LO60673 3130 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 LCHNA4D1U4 455 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 KPNA6O60684 536 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 SLC1A4P43007 532 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 SNAP25P60880 206 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL4A3-201ENST00000304990 NFRKBQ6P4R8 1299 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 TMCO2Q7Z6W1 182 aaPredicted RBP11.98□□□□□ -0.49
COL4A3-201ENST00000304990 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 MKL1Q969V6 931 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 TGS1Q96RS0 853 aaKnown RBP11.98□□□□□ -0.49
COL4A3-201ENST00000304990 MPHOSPH6Q99547 160 aaKnown RBP11.98□□□□□ -0.49
COL4A3-201ENST00000304990 MTMR4Q9NYA4 1195 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 SYNPO2Q9UMS6 1093 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 MTMR7Q9Y216 660 aa11.98□□□□□ -0.49
COL4A3-201ENST00000304990 XIRP2A4UGR9 3374 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 DCXO43602 365 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 HMMRO75330 724 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 ATP5JP18859 108 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 WDR5P61964 334 aaKnown RBP11.97□□□□□ -0.49
COL4A3-201ENST00000304990 PTPN11Q06124 597 aaPredicted RBP11.97□□□□□ -0.49
COL4A3-201ENST00000304990 PPP2R5BQ15173 497 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 PTGISQ16647 500 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 LRRFIP1Q32MZ4 808 aaKnown RBP11.97□□□□□ -0.49
COL4A3-201ENST00000304990 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
COL4A3-201ENST00000304990 MUM1L1Q5H9M0 696 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.97□□□□□ -0.49
COL4A3-201ENST00000304990 FBXL18Q96ME1 805 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
COL4A3-201ENST00000304990 HAUS7Q99871 368 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 KCNH6Q9H252 994 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 SUGCTQ9HAC7 445 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 FAM50BQ9Y247 325 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 LCTP09848 1927 aa11.97□□□□□ -0.49
COL4A3-201ENST00000304990 CHD7Q9P2D1 2997 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 MUC6Q6W4X9 2439 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.49
COL4A3-201ENST00000304990 IGKV6D-41A0A0C4DH26 115 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 PTPDC1A2A3K4 754 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.49
COL4A3-201ENST00000304990 MCCP23508 829 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 ALDH5A1P51649 535 aaPredicted RBP11.96□□□□□ -0.49
COL4A3-201ENST00000304990 DEFB103AP81534 67 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 PDE4BQ07343 736 aa11.96□□□□□ -0.49
COL4A3-201ENST00000304990 PDE4DQ08499 809 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms