RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 IFNAR1P17181 557 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
APLF-201ENST00000303795 CABP7Q86V35 215 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 VIPAS39Q9H9C1 493 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 FAM169AQ9Y6X4 670 aa13.2□□□□□ -0.3
APLF-201ENST00000303795 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
APLF-201ENST00000303795 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 CALML3P27482 149 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 GJC1P36383 396 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 E2F5Q15329 346 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
APLF-201ENST00000303795 C2CD5Q86YS7 1000 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
APLF-201ENST00000303795 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 TECPR2O15040 1411 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 ANKRD33BA6NCL7 494 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 SRGAP2O75044 1071 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 RPSAP08865 295 aaKnown RBP13.19□□□□□ -0.3
APLF-201ENST00000303795 PEX19P40855 299 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 CLNS1AP54105 237 aaKnown RBP13.19□□□□□ -0.3
APLF-201ENST00000303795 CEP120Q8N960 986 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
APLF-201ENST00000303795 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 TMOD2Q9NZR1 351 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 PBX1P40424 430 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 LRCH2Q5VUJ6 765 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 RRAGAQ7L523 313 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
APLF-201ENST00000303795 GOLGA6BA6NDN3 693 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 SLC1A4P43007 532 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 ACTN3Q08043 901 aaPredicted RBP13.18□□□□□ -0.3
APLF-201ENST00000303795 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 TSG101Q99816 390 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
APLF-201ENST00000303795 MORC3Q14149 939 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
APLF-201ENST00000303795 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 SFI1A8K8P3 1242 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 KIF5AQ12840 1032 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 TAF4BQ92750 862 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 SH3GL2Q99962 352 aa13.18□□□□□ -0.3
APLF-201ENST00000303795 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
APLF-201ENST00000303795 TLDC1Q6P9B6 456 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 CTNNBL1Q8WYA6 563 aaPredicted RBP13.17□□□□□ -0.3
APLF-201ENST00000303795 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
APLF-201ENST00000303795 ANKRD2Q9GZV1 360 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 MAATS1Q7Z4T9 603 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
APLF-201ENST00000303795 EHD4Q9H223 541 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 HPCAL4Q9UM19 191 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 PCDHB13Q9Y5F0 798 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 SLIT1O75093 1534 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 CPDO75976 1380 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 TCP10L2B9ZVM9 353 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 STX10O60499 249 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
APLF-201ENST00000303795 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 NONOQ15233 471 aaKnown RBP eCLIP13.17□□□□□ -0.3
APLF-201ENST00000303795 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
APLF-201ENST00000303795 BORCS6Q96GS4 357 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 CAPS2Q9BXY5 557 aa13.17□□□□□ -0.3
APLF-201ENST00000303795 C5P01031 1676 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 POTEMA6NI47 508 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 AMPD3Q01432 767 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 SRBD1Q8N5C6 995 aaKnown RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 NOA1Q8NC60 698 aaKnown RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 IRF6O14896 467 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 HARSP12081 509 aaKnown RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 SCP2P22307 547 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 PRR16Q569H4 304 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 RAD9BQ6WBX8 426 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
APLF-201ENST00000303795 GNA11P29992 359 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 CASP7P55210 303 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 CALCRLQ16602 461 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
APLF-201ENST00000303795 UBR1Q8IWV7 1749 aa13.15□□□□□ -0.3
APLF-201ENST00000303795 GOLGA6L10A6NI86 522 aa13.15□□□□□ -0.3
APLF-201ENST00000303795 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.3
APLF-201ENST00000303795 GNAQP50148 359 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms