RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SERPINB2P05120 415 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 TRIM21P19474 475 aaKnown RBP14.43□□□□□ -0.1
HIF3A-204ENST00000300862 TBC1D8BQ0IIM8 1120 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 LONRF2Q1L5Z9 754 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 DYMQ7RTS9 669 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 GJA10Q969M2 543 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 CNOT6LQ96LI5 555 aaKnown RBP14.43□□□□□ -0.1
HIF3A-204ENST00000300862 FUT8Q9BYC5 575 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 SUGCTQ9HAC7 445 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 LTBP4Q8N2S1 1624 aa14.43□□□□□ -0.1
HIF3A-204ENST00000300862 SLC37A4O43826 429 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 PDHBP11177 359 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 IL1R1P14778 569 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 MTIF2P46199 727 aaKnown RBP14.42□□□□□ -0.1
HIF3A-204ENST00000300862 HERVK_113P62684 666 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 CEP112Q8N8E3 955 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 KIAA0895Q8NCT3 520 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 TBC1D16Q8TBP0 767 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 MXD3Q9BW11 206 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 CAPN11Q9UMQ6 739 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 POTEMA6NI47 508 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 ATP8B1O43520 1251 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 AKR1B1P15121 316 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 ATP2B4P23634 1241 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 GYS2P54840 703 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 MCM6Q14566 821 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 SMC1AQ14683 1233 aaKnown RBP14.42□□□□□ -0.1
HIF3A-204ENST00000300862 NOA1Q8NC60 698 aaKnown RBP14.42□□□□□ -0.1
HIF3A-204ENST00000300862 DHTKD1Q96HY7 919 aaPredicted RBP14.42□□□□□ -0.1
HIF3A-204ENST00000300862 AK8Q96MA6 479 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 DNAJC7Q99615 494 aa14.42□□□□□ -0.1
HIF3A-204ENST00000300862 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
HIF3A-204ENST00000300862 DDX60LQ5H9U9 1706 aaKnown RBP14.42□□□□□ -0.1
HIF3A-204ENST00000300862 SRGAP2O75044 1071 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 SRGNP10124 158 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 GYS1P13807 737 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 CCNE1P24864 410 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 DNM2P50570 870 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 TSR1Q2NL82 804 aaKnown RBP14.41□□□□□ -0.1
HIF3A-204ENST00000300862 DPP8Q6V1X1 898 aaPredicted RBP14.41□□□□□ -0.1
HIF3A-204ENST00000300862 C15orf52Q6ZUT6 534 aaKnown RBP14.41□□□□□ -0.1
HIF3A-204ENST00000300862 NUDT12Q9BQG2 462 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 DAGLAQ9Y4D2 1042 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 A0A1W2PQC6 194 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 EDIL3O43854 480 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 MYL1P05976 194 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 CYP27A1Q02318 531 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 GRB10Q13322 594 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 CALCRLQ16602 461 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 UBE2SQ16763 222 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 MUM1L1Q5H9M0 696 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 CCDC122Q5T0U0 273 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 TXLNBQ8N3L3 684 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 C7orf25Q9BPX7 421 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 NOC4LQ9BVI4 516 aaKnown RBP14.41□□□□□ -0.1
HIF3A-204ENST00000300862 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
HIF3A-204ENST00000300862 DUSP10Q9Y6W6 482 aa14.41□□□□□ -0.1
HIF3A-204ENST00000300862 RCCD1A6NED2 376 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 MYMKA6NI61 221 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 PLCG2P16885 1265 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 ATP2B2Q01814 1243 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CRY2Q49AN0 593 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 FNBP4Q8N3X1 1017 aaPredicted RBP14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CALML4Q96GE6 196 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 LACRTQ9GZZ8 138 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 DDX4Q9NQI0 724 aaKnown RBP14.4□□□□□ -0.1
HIF3A-204ENST00000300862 BLOC1S4Q9NUP1 217 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 MTMR4Q9NYA4 1195 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 LRWD1Q9UFC0 647 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 MYO6Q9UM54 1294 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CTAGE15A4D2H0 777 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CCDC151A5D8V7 595 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CTAGE8P0CG41 777 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 SLC16A2P36021 539 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 TNNI2P48788 182 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 NT5C2P49902 561 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
HIF3A-204ENST00000300862 MIIPQ5JXC2 388 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CTAGE6Q86UF2 777 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CTAGE4Q8IX94 777 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 GLIS3Q8NEA6 775 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CCDC47Q96A33 483 aaKnown RBP14.4□□□□□ -0.1
HIF3A-204ENST00000300862 RBM17Q96I25 401 aaKnown RBP14.4□□□□□ -0.1
HIF3A-204ENST00000300862 CUEDC2Q9H467 287 aa14.4□□□□□ -0.1
HIF3A-204ENST00000300862 ATP1A1P05023 1023 aaKnown RBP14.39□□□□□ -0.11
HIF3A-204ENST00000300862 IDEP14735 1019 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 SCNN1DP51172 638 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 VSNL1P62760 191 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 AMPD2Q01433 879 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 KCNK18Q7Z418 384 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 KIAA1328Q86T90 577 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 PNMA5Q96PV4 448 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 TTYH3Q9C0H2 523 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 RIOX1Q9H6W3 641 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 CDK5RAP2Q96SN8 1893 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 BICDL2A1A5D9 508 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 UBAP1LF5GYI3 381 aa14.39□□□□□ -0.11
HIF3A-204ENST00000300862 PLEKP08567 350 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms