RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 CCDC34Q96HJ3 373 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
CHMP4C-201ENST00000297265 ERCC5P28715 1186 aaPredicted RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 STAT6P42226 847 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 TXKP42681 527 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 RRAGBQ5VZM2 374 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 CCDC84Q86UT8 332 aaPredicted RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 MICALL2Q8IY33 904 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 TRMT44Q8IYL2 757 aaKnown RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 SMYD4Q8IYR2 804 aaPredicted RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 KIAA1524Q8TCG1 905 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 PLIN2Q99541 437 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 KLRC4O43908 158 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 TXLNAP40222 546 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 CALCRLQ16602 461 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 CT47A1Q5JQC4 288 aaPredicted RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 CABP7Q86V35 215 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 C17orf53Q8N3J3 647 aaPredicted RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 NAP1L5Q96NT1 182 aaPredicted RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 CNOT7Q9UIV1 285 aaKnown RBP15.35■□□□□ 0.05
CHMP4C-201ENST00000297265 PLCG1P19174 1290 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 STAT2P52630 851 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 FAM83BQ5T0W9 1011 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 GJA10Q969M2 543 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 MBOAT7Q96N66 472 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 NUDT12Q9BQG2 462 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 GLT8D2Q9H1C3 349 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 VCPKMTQ9H867 229 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 INTS13Q9NVM9 706 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 NFE2L3Q9Y4A8 694 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 ATAD5Q96QE3 1844 aa15.34■□□□□ 0.05
CHMP4C-201ENST00000297265 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 CYP3A7P24462 503 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 PDIA5Q14554 519 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 USH1GQ495M9 461 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 LRRC8AQ8IWT6 810 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 ANO3Q9BYT9 981 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 DACH1Q9UI36 760 aa15.33■□□□□ 0.05
CHMP4C-201ENST00000297265 ZNF541Q9H0D2 1346 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 USP11P51784 963 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 TPM4P67936 248 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 GRB10Q13322 594 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 TBC1D10BQ4KMP7 808 aaPredicted RBP15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 PNMA5Q96PV4 448 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 DDX25Q9UHL0 483 aaKnown RBP15.33■□□□□ 0.04
CHMP4C-201ENST00000297265 POTEMA6NI47 508 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 PLA2G6O60733 806 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 ASNSP08243 561 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 CUEDC2Q9H467 287 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 KCNMB3Q9NPA1 279 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 BLOC1S4Q9NUP1 217 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 GJA3Q9Y6H8 435 aa15.32■□□□□ 0.04
CHMP4C-201ENST00000297265 OFD1O75665 1012 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 GCFC2P16383 781 aaKnown RBP15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 UBASH3AP57075 661 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 AP3B2Q13367 1082 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 NOLC1Q14978 699 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 ZYXQ15942 572 aaKnown RBP15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 FILIP1Q7Z7B0 1213 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 LRWD1Q9UFC0 647 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 PIK3CDO00329 1044 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 MYL1P05976 194 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 KCNB1Q14721 858 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 ECM1Q16610 540 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 SPATA1Q5VX52 437 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 LENG9Q96B70 501 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 TRIM9Q9C026 710 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 DEFB129Q9H1M3 183 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 FBXO28Q9NVF7 368 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 IMPACTQ9P2X3 320 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 GDAQ9Y2T3 454 aa15.31■□□□□ 0.04
CHMP4C-201ENST00000297265 PRCPP42785 496 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 STX17P56962 302 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 NBPF12Q5TAG4 269 aaPredicted RBP15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 CDKAL1Q5VV42 579 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 MOXD1Q6UVY6 613 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 C7orf25Q9BPX7 421 aa15.3■□□□□ 0.04
CHMP4C-201ENST00000297265 RHOBTB3O94955 611 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 SERPINC1P01008 464 aa15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 HOXA13P31271 388 aaPredicted RBP15.29■□□□□ 0.04
CHMP4C-201ENST00000297265 INPP5BP32019 993 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms