RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 DMTNQ08495 405 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 CALCRLQ16602 461 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 ZNF569Q5MCW4 686 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 TEX35Q5T0J7 233 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 RSRC2Q7L4I2 434 aaKnown RBP10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 P2RX5Q93086 422 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 CHP1Q99653 195 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 USP40Q9NVE5 1235 aa10.42□□□□□ -0.74
UBLCP1-201ENST00000296786 B4DLN1 442 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 EDIL3O43854 480 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 SHMT1P34896 483 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 AMPD3Q01432 767 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 DOK7Q18PE1 504 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 ANKRD40Q6AI12 368 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 ADGRF4Q8IZF3 695 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 SLF1Q9BQI6 1058 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 JMJD4Q9H9V9 463 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 LRWD1Q9UFC0 647 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 SWAP70Q9UH65 585 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 C10orf71Q711Q0 1435 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 BICDL2A1A5D9 508 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 POTEMA6NI47 508 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 SRGNP10124 158 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 DNM2P50570 870 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 ZNF543Q08ER8 600 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 GRB10Q13322 594 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 BMS1Q14692 1282 aaKnown RBP10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 GPR161Q8N6U8 529 aaKnown RBP10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 KIAA0895Q8NCT3 520 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 OR8K1Q8NGG5 319 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 HPS3Q969F9 1004 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 DNAJC7Q99615 494 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 BLOC1S4Q9NUP1 217 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 LUC7L2Q9Y383 392 aaKnown RBP10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 FHOD1Q9Y613 1164 aa10.41□□□□□ -0.74
UBLCP1-201ENST00000296786 PNMA6FA0A0J9YX94 578 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 PPP1R11O60927 126 aaPredicted RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 ZRANB2O95218 330 aaKnown RBP eCLIP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 NDUFA10O95299 355 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 ARHGAP25P42331 645 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 TNNI2P48788 182 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 UBE2SQ16763 222 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 TMEM266Q2M3C6 531 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 TTBK2Q6IQ55 1244 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CDC42EP5Q6NZY7 148 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CNNM4Q6P4Q7 775 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 TMCO3Q6UWJ1 677 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 SV2BQ7L1I2 683 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 PROM2Q8N271 834 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 SLC35F6Q8N357 371 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 MYO3BQ8WXR4 1341 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 GOLGA1Q92805 767 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CNOT6LQ96LI5 555 aaKnown RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 RIC8AQ9NPQ8 531 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CAPN11Q9UMQ6 739 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CTAGE9A4FU28 777 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 MPHOSPH10O00566 681 aaKnown RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 PNMA6AP0CW24 399 aaPredicted RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 SLURP2P0DP57 97 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 MCM6Q14566 821 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 PPP1R18Q6NYC8 613 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 WDR59Q6PJI9 974 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 LARP4BQ92615 738 aaKnown RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CDK5RAP3Q96JB5 506 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 PNMA5Q96PV4 448 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 GTPBP4Q9BZE4 634 aaKnown RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 QTRT2Q9H974 415 aaKnown RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 SLC39A2Q9NP94 309 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 STK17AQ9UEE5 414 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 CDC23Q9UJX2 597 aa10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 EPN1Q9Y6I3 576 aaPredicted RBP10.4□□□□□ -0.74
UBLCP1-201ENST00000296786 MYMKA6NI61 221 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 NPR1P16066 1061 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 SLC16A2P36021 539 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 PPP1R2P41236 205 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 NFIAQ12857 509 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 CCDC96Q2M329 555 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 KIF4BQ2VIQ3 1234 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 COBLL1Q53SF7 1204 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 UTP14CQ5TAP6 766 aaKnown RBP10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 KCTD1Q719H9 257 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 SRGAP1Q7Z6B7 1085 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 FAM114A1Q8IWE2 563 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 RABGGTAQ92696 567 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 RAB34Q9BZG1 259 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 TTYH3Q9C0H2 523 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 REXO2Q9Y3B8 237 aaKnown RBP10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 SLX4Q8IY92 1834 aa10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 NKRFO15226 690 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 SEC31AO94979 1220 aaKnown RBP10.39□□□□□ -0.75
UBLCP1-201ENST00000296786 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms