RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 FGD4Q96M96 766 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 MYH6P13533 1939 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
HMGB2-201ENST00000296503 ZNF865P0CJ78 1059 aaPredicted RBP13.99□□□□□ -0.17
HMGB2-201ENST00000296503 APOBRQ0VD83 1088 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 SLC30A10Q6XR72 485 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
HMGB2-201ENST00000296503 ANKLE1Q8NAG6 615 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 BRF1Q92994 677 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 PAWRQ96IZ0 340 aaKnown RBP13.99□□□□□ -0.17
HMGB2-201ENST00000296503 SPZ1Q9BXG8 430 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 FAM184BQ9ULE4 1060 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 PPP1R11O60927 126 aaPredicted RBP13.98□□□□□ -0.17
HMGB2-201ENST00000296503 CFBP00751 764 aa13.98□□□□□ -0.17
HMGB2-201ENST00000296503 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
HMGB2-201ENST00000296503 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
HMGB2-201ENST00000296503 ZSWIM6Q9HCJ5 1215 aa13.98□□□□□ -0.17
HMGB2-201ENST00000296503 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
HMGB2-201ENST00000296503 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
HMGB2-201ENST00000296503 GOLGA8AA7E2F4 631 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 GOLGA8BA8MQT2 603 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 RARBP10826 455 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 AKR1A1P14550 325 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 RTN1Q16799 776 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 C8orf34Q49A92 452 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 EEPD1Q7L9B9 569 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 ARRDC4Q8NCT1 418 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 MPHOSPH6Q99547 160 aaKnown RBP13.97□□□□□ -0.17
HMGB2-201ENST00000296503 MAF1Q9H063 256 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 DDX49Q9Y6V7 483 aaKnown RBP13.97□□□□□ -0.17
HMGB2-201ENST00000296503 B4DLN1 442 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
HMGB2-201ENST00000296503 MRPL12P52815 198 aaKnown RBP13.97□□□□□ -0.17
HMGB2-201ENST00000296503 TMTC3Q6ZXV5 915 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
HMGB2-201ENST00000296503 TM6SF1Q9BZW5 370 aa13.97□□□□□ -0.17
HMGB2-201ENST00000296503 SEC24BO95487 1268 aa13.96□□□□□ -0.17
HMGB2-201ENST00000296503 CCDC144BQ3MJ40 725 aa13.96□□□□□ -0.17
HMGB2-201ENST00000296503 DNERQ8NFT8 737 aa13.96□□□□□ -0.17
HMGB2-201ENST00000296503 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
HMGB2-201ENST00000296503 DPF3Q92784 378 aa13.96□□□□□ -0.17
HMGB2-201ENST00000296503 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
HMGB2-201ENST00000296503 HTATIP2Q9BUP3 242 aa13.96□□□□□ -0.17
HMGB2-201ENST00000296503 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.17
HMGB2-201ENST00000296503 ASTN1O14525 1302 aa13.96□□□□□ -0.18
HMGB2-201ENST00000296503 hCG_1642624A0A1W2PR95 340 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.181e-323■□□□□ 8.4
HMGB2-201ENST00000296503 PDE4DQ08499 809 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 NOL8Q76FK4 1167 aaKnown RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 UBE2Q1Q7Z7E8 422 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 C11orf49Q9H6J7 331 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 XPNPEP3Q9NQH7 507 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 MCM3APO60318 1980 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 BRCA2P51587 3418 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 LOC102724159A0A0B4J2E5 919 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 CCDC196A0A1B0GTZ2 297 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 GCOM1H8Y6P7 765 aaPredicted RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 POLR2MP0CAP2 368 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 ADD1P35611 737 aaKnown RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 PPP2R5BQ15173 497 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 PWP2Q15269 919 aaKnown RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 L1TD1Q5T7N2 865 aaKnown RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 NSUN6Q8TEA1 469 aaKnown RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 RMDN3Q96TC7 470 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 PDRG1Q9NUG6 133 aa13.95□□□□□ -0.18
HMGB2-201ENST00000296503 MAP3K20Q9NYL2 800 aaKnown RBP13.95□□□□□ -0.18
HMGB2-201ENST00000296503 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 PGK1P00558 417 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 CDC27P30260 824 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
HMGB2-201ENST00000296503 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
HMGB2-201ENST00000296503 RCAN1P53805 252 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 ANAPC15P60006 121 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 TNFAIP2Q03169 654 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 RNF180Q86T96 592 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
HMGB2-201ENST00000296503 SAMD3Q8N6K7 520 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 MORC4Q8TE76 937 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
HMGB2-201ENST00000296503 AGXT2Q9BYV1 514 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 SENP6Q9GZR1 1112 aaPredicted RBP13.94□□□□□ -0.18
HMGB2-201ENST00000296503 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 COL20A1Q9P218 1284 aa13.94□□□□□ -0.18
HMGB2-201ENST00000296503 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
HMGB2-201ENST00000296503 OPLAHO14841 1288 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 ADCYAP1R1P41586 468 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 HSD17B4P51659 736 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 IQSEC1Q6DN90 963 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
HMGB2-201ENST00000296503 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
HMGB2-201ENST00000296503 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms