RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 PCDHA13Q9Y5I0 950 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 A0A1B0GUL6 1792 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 FLT1P17948 1338 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 A6NNZ2 444 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 GOLGA8KD6RF30 607 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 EBAG9O00559 213 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 EIF3HO15372 352 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC36-201ENST00000296449 NTSR2O95665 410 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 FCER1AP12319 257 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 SLC7A5Q01650 507 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 TUBB8Q3ZCM7 444 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 CCDC178Q5BJE1 867 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 NFRKBQ6P4R8 1299 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 STAG2Q8N3U4 1231 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 SMARCAL1Q9NZC9 954 aa11.34□□□□□ -0.59
CCDC36-201ENST00000296449 KAT6BQ8WYB5 2073 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 TSPY2A6NKD2 308 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 EPHB6O15197 1021 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 EPB41P11171 864 aaKnown RBP11.33□□□□□ -0.6
CCDC36-201ENST00000296449 PPP1R2P41236 205 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 MATR3P43243 847 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC36-201ENST00000296449 PARP10Q53GL7 1025 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 FKBP15Q5T1M5 1219 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 HAUS3Q68CZ6 603 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 MICALL1Q8N3F8 863 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
CCDC36-201ENST00000296449 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 CUEDC2Q9H467 287 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 CXCR5P32302 372 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 KIF11P52732 1056 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 EPHB4P54760 987 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 GNGT1P63211 74 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 CERS3Q8IU89 383 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 NSUN4Q96CB9 384 aaKnown RBP11.33□□□□□ -0.6
CCDC36-201ENST00000296449 PSMB7Q99436 277 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 RABEP2Q9H5N1 569 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 EHD2Q9NZN4 543 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 STIM2Q9P246 746 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 SIK3Q9Y2K2 1263 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 HYOU1Q9Y4L1 999 aa11.33□□□□□ -0.6
CCDC36-201ENST00000296449 LAD1O00515 517 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 OPA1O60313 960 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 LCA5LO95447 670 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 TCP1P17987 556 aaKnown RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 EIF4A3P38919 411 aaKnown RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 PRPHP41219 470 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 ASIC1P78348 528 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 TXNRD1Q16881 649 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 SLC35G1Q2M3R5 365 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 EMBQ6PCB8 327 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 CABP7Q86V35 215 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 CCDC47Q96A33 483 aaKnown RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 FAM84BQ96KN1 310 aaPredicted RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 C7orf25Q9BPX7 421 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 LAMB2P55268 1798 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 CLSTN1O94985 981 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 LIG3P49916 1009 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 SKOR1P84550 965 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 MECOMQ03112 1051 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 CAVIN4Q5BKX8 364 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 ALS2CLQ60I27 953 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 TTC19Q6DKK2 380 aaPredicted RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 KIAA0895Q8NCT3 520 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 KAT2BQ92831 832 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 HPS3Q969F9 1004 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 CRNKL1Q9BZJ0 848 aaKnown RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 FAM207AQ9NSI2 230 aaPredicted RBP11.32□□□□□ -0.6
CCDC36-201ENST00000296449 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 ABCA3Q99758 1704 aa11.32□□□□□ -0.6
CCDC36-201ENST00000296449 LAMB1P07942 1786 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 NCK2O43639 380 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 ERLIN2O94905 339 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 COBLL1Q53SF7 1204 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 MMS22LQ6ZRQ5 1243 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 CAVIN3Q969G5 261 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 AK8Q96MA6 479 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 ALS2CR12Q96Q35 445 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 IL17RBQ9NRM6 502 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 TCP11L1Q9NUJ3 509 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC36-201ENST00000296449 MYH1P12882 1939 aa11.31□□□□□ -0.6
CCDC36-201ENST00000296449 ATXN2Q99700 1313 aaKnown RBP11.31□□□□□ -0.6
CCDC36-201ENST00000296449 MYH10P35580 1976 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms